RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 ZNF70Q9UC06 446 aaPredicted RBP18.13■□□□□ 0.49
SHARPIN-208ENST00000533948 ZSWIM8A7E2V4 1837 aa18.13■□□□□ 0.49
SHARPIN-208ENST00000533948 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
SHARPIN-208ENST00000533948 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
SHARPIN-208ENST00000533948 TEPSINQ96N21 525 aa18.12■□□□□ 0.49
SHARPIN-208ENST00000533948 F6X3S4 739 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 HIBADHP31937 336 aaKnown RBP18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 VGLL4Q14135 290 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 TAF1CQ15572 869 aaPredicted RBP18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 MFSD14BQ5SR56 506 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 TMEM106CQ9BVX2 250 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 TMEM39BQ9GZU3 492 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 SERPINA10Q9UK55 444 aa18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 TTF2Q9UNY4 1162 aaKnown RBP18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 COLQQ9Y215 455 aaPredicted RBP18.11■□□□□ 0.49
SHARPIN-208ENST00000533948 FAM205AQ6ZU69 1335 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 CCL15-CCL14A0A0B4J2E2 113 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 TCP10L2B9ZVM9 353 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 TNNI2P48788 182 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 UBE4AQ14139 1066 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 CCL15Q16663 113 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 SLC9C1Q4G0N8 1177 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 TDRD7Q8NHU6 1098 aaKnown RBP18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 CEP290O15078 2479 aa18.1■□□□□ 0.49
SHARPIN-208ENST00000533948 ARAP2Q8WZ64 1704 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 GRM8O00222 908 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 GYG1P46976 350 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 GRIK5Q16478 980 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 NBPF11Q86T75 865 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 OTUD5Q96G74 571 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 ARHGAP39Q9C0H5 1083 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 ZFYVE28Q9HCC9 887 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 TRIOBPQ9H2D6 2365 aa18.09■□□□□ 0.49
SHARPIN-208ENST00000533948 WDHD1O75717 1129 aaPredicted RBP18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 GTF2A2P52657 109 aa18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 MAP3K9P80192 1104 aa18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 SLC4A8Q2Y0W8 1093 aa18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 VPS37DQ86XT2 251 aa18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 SH3TC2Q8TF17 1288 aa18.08■□□□□ 0.48
SHARPIN-208ENST00000533948 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
SHARPIN-208ENST00000533948 FAM84BQ96KN1 310 aaPredicted RBP18.07■□□□□ 0.48
SHARPIN-208ENST00000533948 CSADQ9Y600 493 aa18.07■□□□□ 0.48
SHARPIN-208ENST00000533948 FRAT2O75474 233 aaPredicted RBP18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 CRKP46108 304 aa18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 CACNB3P54284 484 aa18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 SLC4A10Q6U841 1118 aa18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 PUS3Q9BZE2 481 aaKnown RBP18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 SZT2Q5T011 3432 aa18.06■□□□□ 0.48
SHARPIN-208ENST00000533948 ZNF521Q96K83 1311 aa18.05■□□□□ 0.48
SHARPIN-208ENST00000533948 H0YGN5 161 aa18.05■□□□□ 0.48
SHARPIN-208ENST00000533948 SRCIN1Q9C0H9 1055 aa18.05■□□□□ 0.48
SHARPIN-208ENST00000533948 IQSEC3Q9UPP2 1182 aaPredicted RBP18.05■□□□□ 0.48
SHARPIN-208ENST00000533948 SNCAIPQ9Y6H5 919 aa18.05■□□□□ 0.48
SHARPIN-208ENST00000533948 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
SHARPIN-208ENST00000533948 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 SPDYE5A6NIY4 337 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 BTBD19C9JJ37 291 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 LACTBP83111 547 aaPredicted RBP18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 HDLBPQ00341 1268 aaKnown RBP18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 KIF22Q14807 665 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 TBC1D22AQ8WUA7 517 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 HOOK2Q96ED9 719 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
SHARPIN-208ENST00000533948 TLR2O60603 784 aa18.02■□□□□ 0.48
SHARPIN-208ENST00000533948 CHAF1AQ13111 956 aaPredicted RBP18.02■□□□□ 0.48
SHARPIN-208ENST00000533948 FBXO33Q7Z6M2 555 aa18.02■□□□□ 0.48
SHARPIN-208ENST00000533948 ZKSCAN4Q969J2 545 aaPredicted RBP18.02■□□□□ 0.48
SHARPIN-208ENST00000533948 TEKT1Q969V4 418 aa18.02■□□□□ 0.48
SHARPIN-208ENST00000533948 TMOD2Q9NZR1 351 aa18.02■□□□□ 0.48
SHARPIN-208ENST00000533948 IRF6O14896 467 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 CETPP11597 493 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 CTGFP29279 349 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 WRNIP1Q96S55 665 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 MRIQ9BWK5 157 aa18.01■□□□□ 0.47
SHARPIN-208ENST00000533948 MTFR1Q15390 333 aa18■□□□□ 0.47
SHARPIN-208ENST00000533948 METTL24Q5JXM2 366 aa18■□□□□ 0.47
SHARPIN-208ENST00000533948 CHRDL2Q6WN34 429 aa18■□□□□ 0.47
SHARPIN-208ENST00000533948 ERO1BQ86YB8 467 aa18■□□□□ 0.47
SHARPIN-208ENST00000533948 KAZALD1Q96I82 304 aa18■□□□□ 0.47
SHARPIN-208ENST00000533948 RANBP2P49792 3224 aaKnown RBP18■□□□□ 0.47
SHARPIN-208ENST00000533948 SNAPC2Q13487 334 aa17.99■□□□□ 0.47
SHARPIN-208ENST00000533948 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
SHARPIN-208ENST00000533948 CPA4Q9UI42 421 aa17.99■□□□□ 0.47
SHARPIN-208ENST00000533948 GNRH1P01148 92 aa17.98■□□□□ 0.47
SHARPIN-208ENST00000533948 NBPF7P0C2Y1 421 aaPredicted RBP17.98■□□□□ 0.47
SHARPIN-208ENST00000533948 DCAF15Q66K64 600 aa17.98■□□□□ 0.47
SHARPIN-208ENST00000533948 FAM83AQ86UY5 434 aa17.98■□□□□ 0.47
SHARPIN-208ENST00000533948 INPP5BP32019 993 aa17.97■□□□□ 0.47
SHARPIN-208ENST00000533948 PPIL2Q13356 520 aa17.97■□□□□ 0.47
SHARPIN-208ENST00000533948 LRRC24Q50LG9 513 aa17.97■□□□□ 0.47
SHARPIN-208ENST00000533948 FKBP1CQ5VVH2 108 aa17.97■□□□□ 0.47
SHARPIN-208ENST00000533948 MIGA2Q7L4E1 593 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms