RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 C8orf34Q49A92 452 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 HELBQ8NG08 1087 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 PSMD1Q99460 953 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 TAOK3Q9H2K8 898 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
CCDC90B-218ENST00000533761 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 OTUD7AQ8TE49 926 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 RTFDC1Q9BY42 306 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 TSHZ2Q9NRE2 1034 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 GFRA3O60609 400 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 UFL1O94874 794 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 DSG2Q14126 1118 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 UBE4AQ14139 1066 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 PUM3Q15397 648 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 CCDC158Q5M9N0 1113 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 TBC1D16Q8TBP0 767 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 NEUROD6Q96NK8 337 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 EYA3Q99504 573 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 VPS33BQ9H267 617 aa13.28□□□□□ -0.28
CCDC90B-218ENST00000533761 LTBP3Q9NS15 1303 aa13.27□□□□□ -0.28
CCDC90B-218ENST00000533761 ZNF609O15014 1411 aa13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 HIP1O00291 1037 aa13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 GSPT1P15170 499 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 WASHC4Q2M389 1173 aa13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 SLC51AQ86UW1 340 aa13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 TICAM2Q86XR7 235 aa13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 POLLQ9UGP5 575 aa13.27□□□□□ -0.29
CCDC90B-218ENST00000533761 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 SDSP20132 328 aa13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 ATP2B3Q16720 1220 aa13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 LPIN2Q92539 896 aa13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 FER1L6Q2WGJ9 1857 aa13.26□□□□□ -0.29
CCDC90B-218ENST00000533761 NFKBIEO00221 500 aa13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 SLC5A1P13866 664 aa13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 ATP5JP18859 108 aa13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 PI4K2BQ8TCG2 481 aa13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-218ENST00000533761 REC8O95072 547 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 LMNB1P20700 586 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 ANP32AP39687 249 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 FOSBP53539 338 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 C15orf52Q6ZUT6 534 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 UTRNP46939 3433 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 SNAP23O00161 211 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 FGFR2P21802 821 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 IARSP41252 1262 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 TIMM10P62072 90 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 KCNC4Q03721 635 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 RUFY2Q8WXA3 655 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 JDP2Q8WYK2 163 aa13.24□□□□□ -0.29
CCDC90B-218ENST00000533761 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 RASSF7Q02833 373 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 TTC39AQ5SRH9 613 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-218ENST00000533761 DUOX1Q9NRD9 1551 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 UQCRFS1P1P0C7P4 283 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 AOC3Q16853 763 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
CCDC90B-218ENST00000533761 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 GPR101Q96P66 508 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 HAUS7Q99871 368 aa13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 COA1Q9GZY4 146 aa13.21□□□□□ -0.29
CCDC90B-218ENST00000533761 GNL3LQ9NVN8 582 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms