RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
PACS1-213ENST00000533756 VGLL4Q14135 290 aa11.8□□□□□ -0.52
PACS1-213ENST00000533756 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
PACS1-213ENST00000533756 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
PACS1-213ENST00000533756 C11orf49Q9H6J7 331 aa11.8□□□□□ -0.52
PACS1-213ENST00000533756 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
PACS1-213ENST00000533756 IRF5Q13568 498 aa11.79□□□□□ -0.52
PACS1-213ENST00000533756 ERO1BQ86YB8 467 aa11.79□□□□□ -0.52
PACS1-213ENST00000533756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.79□□□□□ -0.52
PACS1-213ENST00000533756 XAGE3Q8WTP9 111 aa11.79□□□□□ -0.52
PACS1-213ENST00000533756 ISCA1Q9BUE6 129 aa11.79□□□□□ -0.52
PACS1-213ENST00000533756 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
PACS1-213ENST00000533756 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
PACS1-213ENST00000533756 LAMA2P24043 3122 aaKnown RBP11.79□□□□□ -0.52
PACS1-213ENST00000533756 CLRN2A0PK11 232 aa11.78□□□□□ -0.52
PACS1-213ENST00000533756 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
PACS1-213ENST00000533756 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
PACS1-213ENST00000533756 TNFAIP1Q13829 316 aa11.78□□□□□ -0.52
PACS1-213ENST00000533756 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
PACS1-213ENST00000533756 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
PACS1-213ENST00000533756 ATXN2LQ8WWM7 1075 aaKnown RBP11.78□□□□□ -0.52
PACS1-213ENST00000533756 PRMT6Q96LA8 375 aaPredicted RBP11.78□□□□□ -0.52
PACS1-213ENST00000533756 ANXA1P04083 346 aa11.77□□□□□ -0.53
PACS1-213ENST00000533756 ELNP15502 786 aa11.77□□□□□ -0.53
PACS1-213ENST00000533756 EIF2S2P20042 333 aaKnown RBP11.77□□□□□ -0.53
PACS1-213ENST00000533756 FLT3LGP49771 235 aa11.77□□□□□ -0.53
PACS1-213ENST00000533756 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
PACS1-213ENST00000533756 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
PACS1-213ENST00000533756 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.77□□□□□ -0.53
PACS1-213ENST00000533756 OTOFQ9HC10 1997 aa11.77□□□□□ -0.53
PACS1-213ENST00000533756 PDHXO00330 501 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 IRF6O14896 467 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 GTF2IP78347 998 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
PACS1-213ENST00000533756 PPIL2Q13356 520 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 CFAP100Q494V2 611 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 ALYREFQ86V81 257 aaKnown RBP11.76□□□□□ -0.53
PACS1-213ENST00000533756 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 ADAMTS19Q8TE59 1207 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
PACS1-213ENST00000533756 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
PACS1-213ENST00000533756 ECM29Q5VYK3 1845 aa11.75□□□□□ -0.53
PACS1-213ENST00000533756 BCRP11274 1271 aa11.75□□□□□ -0.53
PACS1-213ENST00000533756 CCT4P50991 539 aaKnown RBP11.75□□□□□ -0.53
PACS1-213ENST00000533756 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
PACS1-213ENST00000533756 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
PACS1-213ENST00000533756 ASB2Q96Q27 587 aa11.75□□□□□ -0.53
PACS1-213ENST00000533756 UHRF1Q96T88 793 aaPredicted RBP11.75□□□□□ -0.53
PACS1-213ENST00000533756 LBHD1Q9BQE6 289 aaPredicted RBP11.75□□□□□ -0.53
PACS1-213ENST00000533756 CDH23Q9H251 3354 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
PACS1-213ENST00000533756 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 OGDHLQ9ULD0 1010 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 PCDHAC2Q9Y5I4 1007 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 SNCAIPQ9Y6H5 919 aa11.74□□□□□ -0.53
PACS1-213ENST00000533756 ATP5J2-PTCD1G3V325 749 aa11.73□□□□□ -0.53
PACS1-213ENST00000533756 PPATQ06203 517 aa11.73□□□□□ -0.53
PACS1-213ENST00000533756 TXNRD3Q86VQ6 643 aa11.73□□□□□ -0.53
PACS1-213ENST00000533756 ZBTB38Q8NAP3 1195 aaPredicted RBP11.73□□□□□ -0.53
PACS1-213ENST00000533756 USP38Q8NB14 1042 aa11.73□□□□□ -0.53
PACS1-213ENST00000533756 PARK7Q99497 189 aaKnown RBP11.73□□□□□ -0.53
PACS1-213ENST00000533756 P2RX7Q99572 595 aaKnown RBP11.73□□□□□ -0.53
PACS1-213ENST00000533756 MINPP1Q9UNW1 487 aa11.73□□□□□ -0.53
PACS1-213ENST00000533756 PFASO15067 1338 aa11.72□□□□□ -0.53
PACS1-213ENST00000533756 CERS5Q8N5B7 392 aa11.72□□□□□ -0.53
PACS1-213ENST00000533756 LRFN3Q9BTN0 628 aa11.72□□□□□ -0.53
PACS1-213ENST00000533756 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
PACS1-213ENST00000533756 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
PACS1-213ENST00000533756 AOX1Q06278 1338 aa11.71□□□□□ -0.53
PACS1-213ENST00000533756 TNPO2O14787 897 aaKnown RBP11.71□□□□□ -0.53
PACS1-213ENST00000533756 PDE8AO60658 829 aa11.71□□□□□ -0.53
PACS1-213ENST00000533756 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.53
PACS1-213ENST00000533756 COL6A1P12109 1028 aa11.71□□□□□ -0.53
PACS1-213ENST00000533756 TNNI2P48788 182 aa11.71□□□□□ -0.53
PACS1-213ENST00000533756 FKBP1AP62942 108 aaKnown RBP11.71□□□□□ -0.53
PACS1-213ENST00000533756 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.53
PACS1-213ENST00000533756 CC2D1BQ5T0F9 858 aaKnown RBP11.71□□□□□ -0.53
PACS1-213ENST00000533756 CFAP53Q96M91 514 aa11.71□□□□□ -0.53
PACS1-213ENST00000533756 CDC5LQ99459 802 aaKnown RBP11.71□□□□□ -0.53
PACS1-213ENST00000533756 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.53
PACS1-213ENST00000533756 PIEZO1Q92508 2521 aa11.7□□□□□ -0.54
PACS1-213ENST00000533756 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
PACS1-213ENST00000533756 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
PACS1-213ENST00000533756 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
PACS1-213ENST00000533756 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
PACS1-213ENST00000533756 CD209Q9NNX6 404 aa11.7□□□□□ -0.54
PACS1-213ENST00000533756 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
PACS1-213ENST00000533756 KCNH4Q9UQ05 1017 aa11.7□□□□□ -0.54
PACS1-213ENST00000533756 MGAMO43451 1857 aa11.7□□□□□ -0.54
PACS1-213ENST00000533756 F8W031 263 aaPredicted RBP11.69□□□□□ -0.54
PACS1-213ENST00000533756 PER1O15534 1290 aaPredicted RBP11.69□□□□□ -0.54
PACS1-213ENST00000533756 HMGCRP04035 888 aa11.69□□□□□ -0.54
PACS1-213ENST00000533756 SHHQ15465 462 aa11.69□□□□□ -0.54
PACS1-213ENST00000533756 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
PACS1-213ENST00000533756 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
PACS1-213ENST00000533756 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
PACS1-213ENST00000533756 ZKSCAN4Q969J2 545 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms