RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LMBR1LQ6UX01 489 aa10.96□□□□□ -0.65
COPB1-210ENST00000533533 LDHAL6AQ6ZMR3 332 aa10.96□□□□□ -0.65
COPB1-210ENST00000533533 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.65
COPB1-210ENST00000533533 ZNF594Q96JF6 807 aaPredicted RBP10.96□□□□□ -0.65
COPB1-210ENST00000533533 RBBP6Q7Z6E9 1792 aaKnown RBP10.95□□□□□ -0.66
COPB1-210ENST00000533533 FAM205AQ6ZU69 1335 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 GRM8O00222 908 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 PLIN1O60240 522 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
COPB1-210ENST00000533533 GJA5P36382 358 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 CRHR2Q13324 411 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 RASA3Q14644 834 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 ALDH1L2Q3SY69 923 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 TAF7LQ5H9L4 462 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 INTS3Q68E01 1043 aaKnown RBP10.95□□□□□ -0.66
COPB1-210ENST00000533533 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 ERO1AQ96HE7 468 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 CNNM1Q9NRU3 951 aa10.95□□□□□ -0.66
COPB1-210ENST00000533533 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
COPB1-210ENST00000533533 ATXN8OSP0DMR3 200 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 TNFAIP1Q13829 316 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 MFSD14BQ5SR56 506 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 TDRD7Q8NHU6 1098 aaKnown RBP10.94□□□□□ -0.66
COPB1-210ENST00000533533 PTPN18Q99952 460 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 ZNF70Q9UC06 446 aaPredicted RBP10.94□□□□□ -0.66
COPB1-210ENST00000533533 SERPINA10Q9UK55 444 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 ARAP2Q8WZ64 1704 aa10.94□□□□□ -0.66
COPB1-210ENST00000533533 PTPRCP08575 1304 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 HIBADHP31937 336 aaKnown RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 RARSP54136 660 aaKnown RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 CD99L2Q8TCZ2 262 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 FRAT1Q92837 279 aaPredicted RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 GCC1Q96CN9 775 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 FAM84BQ96KN1 310 aaPredicted RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 EFCC1Q9HA90 598 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 C9orf78Q9NZ63 289 aaPredicted RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
COPB1-210ENST00000533533 PTPN22Q9Y2R2 807 aa10.93□□□□□ -0.66
COPB1-210ENST00000533533 ALDH1L1O75891 902 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 GYG1P46976 350 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 SP3Q02447 781 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 DZIP1LQ8IYY4 767 aaKnown RBP10.92□□□□□ -0.66
COPB1-210ENST00000533533 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 OPTNQ96CV9 577 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 TEPSINQ96N21 525 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 TDRD3Q9H7E2 651 aaKnown RBP10.92□□□□□ -0.66
COPB1-210ENST00000533533 ELP3Q9H9T3 547 aa10.92□□□□□ -0.66
COPB1-210ENST00000533533 CAP1Q01518 475 aa10.91□□□□□ -0.66
COPB1-210ENST00000533533 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.91□□□□□ -0.66
COPB1-210ENST00000533533 CDAN1Q8IWY9 1227 aa10.91□□□□□ -0.66
COPB1-210ENST00000533533 PUS3Q9BZE2 481 aaKnown RBP10.91□□□□□ -0.66
COPB1-210ENST00000533533 TMEM39BQ9GZU3 492 aa10.91□□□□□ -0.66
COPB1-210ENST00000533533 KIF16BQ96L93 1317 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 TCP10L2B9ZVM9 353 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 BCAR3O75815 825 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 CRKP46108 304 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 TNNI2P48788 182 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 GTF2A2P52657 109 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 KAZALD1Q96I82 304 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 SUCLG2Q96I99 432 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 API5Q9BZZ5 524 aaKnown RBP10.9□□□□□ -0.66
COPB1-210ENST00000533533 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.66
COPB1-210ENST00000533533 MROH5Q6ZUA9 1318 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 CCL15-CCL14A0A0B4J2E2 113 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
COPB1-210ENST00000533533 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
COPB1-210ENST00000533533 HDLBPQ00341 1268 aaKnown RBP10.89□□□□□ -0.67
COPB1-210ENST00000533533 VGLL4Q14135 290 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 ARHGEF6Q15052 776 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
COPB1-210ENST00000533533 CCL15Q16663 113 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 FBXO33Q7Z6M2 555 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 VPS37DQ86XT2 251 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.89□□□□□ -0.67
COPB1-210ENST00000533533 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 CSADQ9Y600 493 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 AK9Q5TCS8 1911 aa10.89□□□□□ -0.67
COPB1-210ENST00000533533 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
COPB1-210ENST00000533533 UTYO14607 1347 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
COPB1-210ENST00000533533 GRIK5Q16478 980 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
COPB1-210ENST00000533533 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 TBC1D22AQ8WUA7 517 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 CLUAP1Q96AJ1 413 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 OTUD5Q96G74 571 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 ZNF333Q96JL9 665 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 IQSEC3Q9UPP2 1182 aaPredicted RBP10.88□□□□□ -0.67
COPB1-210ENST00000533533 MYH13Q9UKX3 1938 aa10.88□□□□□ -0.67
COPB1-210ENST00000533533 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms