RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 TRIM34Q9BYJ4 488 aa6.35□□□□□ -1.39
CKAP5-212ENST00000533413 EFCC1Q9HA90 598 aa6.35□□□□□ -1.39
CKAP5-212ENST00000533413 PRKAG2Q9UGJ0 569 aa6.35□□□□□ -1.39
CKAP5-212ENST00000533413 RNMTO43148 476 aaKnown RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 CAPN2P17655 700 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 ZKSCAN8Q15776 578 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 TXNRD1Q16881 649 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 MTHFSDQ2M296 383 aaKnown RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 DEFB132Q7Z7B7 95 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 OTUD7AQ8TE49 926 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 FEZ1Q99689 392 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 BSDC1Q9NW68 430 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 STK32BQ9NY57 414 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 TMEM63CQ9P1W3 806 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 KCPQ6ZWJ8 1503 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 KCNQ2O43526 872 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 FLT3P36888 993 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 NAP1L1P55209 391 aaKnown RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 KCTD2Q14681 263 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 C10orf62Q5T681 223 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 CEP85Q6P2H3 762 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 WDR75Q8IWA0 830 aaKnown RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 FLAD1Q8NFF5 587 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 RTF1Q92541 710 aaKnown RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 BABAM1Q9NWV8 329 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 DDX56Q9NY93 547 aaKnown RBP6.34□□□□□ -1.39
CKAP5-212ENST00000533413 SMC3Q9UQE7 1217 aa6.34□□□□□ -1.39
CKAP5-212ENST00000533413 ANKRD33BA6NCL7 494 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 HIP1RO75146 1068 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 TOMM20Q15388 145 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 CCDC102AQ96A19 550 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 SYTL4Q96C24 671 aaPredicted RBP6.34□□□□□ -1.4
CKAP5-212ENST00000533413 TMX3Q96JJ7 454 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 CEP63Q96MT8 703 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 RAI14Q9P0K7 980 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 SYNPO2Q9UMS6 1093 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.4
CKAP5-212ENST00000533413 SLFN14P0C7P3 912 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 RASSF7Q02833 373 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 PIGBQ92521 554 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 GJA3Q9Y6H8 435 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 SCINQ9Y6U3 715 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 PRC1O43663 620 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 CCT2P78371 535 aaKnown RBP6.33□□□□□ -1.4
CKAP5-212ENST00000533413 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 MPRIPQ6WCQ1 1025 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 SUGP1Q8IWZ8 645 aaKnown RBP6.33□□□□□ -1.4
CKAP5-212ENST00000533413 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 GOPCQ9HD26 462 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 FAM53CQ9NYF3 392 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 EP400Q96L91 3159 aa6.33□□□□□ -1.4
CKAP5-212ENST00000533413 TEFQ10587 303 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 CBLBQ13191 982 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 FAM184AQ8NB25 1140 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 AS3MTQ9HBK9 375 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 CGNQ9P2M7 1197 aaKnown RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 CCNL1Q9UK58 526 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 TRIM6-TRIM34B2RNG4 842 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 VDRP11473 427 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 TNNI2P48788 182 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 HDLBPQ00341 1268 aaKnown RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 PSMD2Q13200 908 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 RC3H1Q5TC82 1133 aaKnown RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 SLC4A10Q6U841 1118 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 AKT1S1Q96B36 256 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 CHAMP1Q96JM3 812 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 TEX13AQ9BXU3 409 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 ALDH8A1Q9H2A2 487 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-212ENST00000533413 ANO2Q9NQ90 1003 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 C4AP0C0L4 1744 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 PTPRCP08575 1304 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 CNTNAP4Q9C0A0 1308 aa6.32□□□□□ -1.4
CKAP5-212ENST00000533413 PDE1AP54750 535 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SATB1Q01826 763 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SYCP1Q15431 976 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SLC15A2Q16348 729 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 LMBRD2Q68DH5 695 aaPredicted RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 RILPL2Q969X0 211 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 INTS4Q96HW7 963 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 MEIS3Q99687 375 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 NSFL1CQ9UNZ2 370 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 WDR33Q9C0J8 1336 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 CTIFO43310 598 aaKnown RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 ABL2P42684 1182 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 CBX1P83916 185 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 FAM160A1Q05DH4 1040 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 SMYD5Q6GMV2 418 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 OGFRQ9NZT2 677 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 ZNF219Q9P2Y4 722 aaPredicted RBP6.31□□□□□ -1.4
CKAP5-212ENST00000533413 HDAC9Q9UKV0 1011 aa6.31□□□□□ -1.4
CKAP5-212ENST00000533413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.31□□□□□ -1.42e-7■■□□□ 14.5
CKAP5-212ENST00000533413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms