RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PIK3C2GO75747 1445 aa8.84□□□□□ -0.99
CSRP1-218ENST00000533402 CDC42BPBQ9Y5S2 1711 aa8.84□□□□□ -0.99
CSRP1-218ENST00000533402 ZBTB24O43167 697 aaPredicted RBP8.84□□□□□ -1
CSRP1-218ENST00000533402 DNAJC8O75937 253 aaPredicted RBP8.84□□□□□ -1
CSRP1-218ENST00000533402 RNF8O76064 485 aa8.84□□□□□ -1
CSRP1-218ENST00000533402 CLTAP09496 248 aa8.84□□□□□ -1
CSRP1-218ENST00000533402 POLE2P56282 527 aa8.84□□□□□ -1
CSRP1-218ENST00000533402 PPP1R9BQ96SB3 815 aa8.84□□□□□ -1
CSRP1-218ENST00000533402 IL16Q14005 1332 aa8.84□□□□□ -1
CSRP1-218ENST00000533402 ST5P78524 1137 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 ARMC2Q8NEN0 867 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 RAB3IPQ96QF0 476 aaPredicted RBP8.83□□□□□ -1
CSRP1-218ENST00000533402 UBAP1LF5GYI3 381 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 GUCY1B3Q02153 619 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 BRD3Q15059 726 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 E2F5Q15329 346 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 GKAP1Q5VSY0 366 aaPredicted RBP8.83□□□□□ -1
CSRP1-218ENST00000533402 ARHGAP24Q8N264 748 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 SREK1Q8WXA9 508 aaKnown RBP8.83□□□□□ -1
CSRP1-218ENST00000533402 HDAC9Q9UKV0 1011 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 NKIRAS1Q9NYS0 192 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 XAB2Q9HCS7 855 aaKnown RBP8.83□□□□□ -1
CSRP1-218ENST00000533402 IFNKQ9P0W0 207 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 SYNMO15061 1565 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 HMOX1P09601 288 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 GNGT1P63211 74 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 ERCC6LQ2NKX8 1250 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 CCDC102BQ68D86 513 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 CUL5Q93034 780 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 NUDT16Q96DE0 195 aaKnown RBP8.83□□□□□ -1
CSRP1-218ENST00000533402 HSP90AA4PQ58FG1 418 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 NUF2Q9BZD4 464 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 CABP2Q9NPB3 220 aa8.83□□□□□ -1
CSRP1-218ENST00000533402 CCT5P48643 541 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 VPS41P49754 854 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 IDI1Q13907 227 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 ZNF131P52739 623 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 IRX1P78414 480 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 BAG1Q99933 345 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 EFCAB6Q5THR3 1501 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 CTNNA2P26232 953 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 TERF2Q15554 542 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 CAVIN4Q5BKX8 364 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 PHLDB3Q6NSJ2 640 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 CLEC11AQ9Y240 323 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 RASSF2P50749 326 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 KANK3Q6NY19 840 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 CAPS2Q9BXY5 557 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 ZSCAN16Q9H4T2 348 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 PZPP20742 1482 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 ELP1O95163 1332 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 HGSO14964 777 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 MTHFSP49914 203 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 WDR78Q5VTH9 848 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 FERMT1Q9BQL6 677 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 MED4Q9NPJ6 270 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 GLI2P10070 1586 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 ARHGAP31Q2M1Z3 1444 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 PPFIA4O75335 1185 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 SATB1Q01826 763 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 RUFY4Q6ZNE9 571 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 RPAP2Q8IXW5 612 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 ZNF215Q9UL58 517 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 SATB2Q9UPW6 733 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 MYCNP04198 464 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 RAD51AP2Q09MP3 1159 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 HSP90AA5PQ58FG0 334 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 TEX13AQ9BXU3 409 aaPredicted RBP8.82□□□□□ -1
CSRP1-218ENST00000533402 YY1AP1Q9H869 796 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 PIK3R4Q99570 1358 aa8.82□□□□□ -1
CSRP1-218ENST00000533402 NPHP3Q7Z494 1330 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 TTC36A6NLP5 189 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 ARMC9Q7Z3E5 817 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 NAPGQ99747 312 aaPredicted RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 TMOD3Q9NYL9 352 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 ATP5DP30049 168 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 TNNC1P63316 161 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 FAM71BQ8TC56 605 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 ZMYM3Q14202 1370 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 FLIIQ13045 1269 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 PPANQ9NQ55 473 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 CTNNA3Q9UI47 895 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 FYB2Q5VWT5 728 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 NOC2LQ9Y3T9 749 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 ZBTB22O15209 634 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 CCDC62Q6P9F0 684 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 VPS52Q8N1B4 723 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 PHAXQ9H814 394 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 SEC63Q9UGP8 760 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 PPP1R9AQ9ULJ8 1098 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 KRT13P13646 458 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 ATP2A2P16615 1042 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 SYKP43405 635 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 DNM1Q05193 864 aaKnown RBP8.81□□□□□ -1
CSRP1-218ENST00000533402 PLVAPQ9BX97 442 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 CXorf56Q9H5V9 222 aa8.81□□□□□ -1
CSRP1-218ENST00000533402 MTRF1LQ9UGC7 380 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms