RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
TRIM3-213ENST00000533309 PPIP5K2O43314 1243 aa19.15■□□□□ 0.66
TRIM3-213ENST00000533309 ECE2O60344 883 aa19.15■□□□□ 0.66
TRIM3-213ENST00000533309 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
TRIM3-213ENST00000533309 GTF2IP78347 998 aa19.15■□□□□ 0.66
TRIM3-213ENST00000533309 SPTY2D1Q68D10 685 aaPredicted RBP19.15■□□□□ 0.66
TRIM3-213ENST00000533309 FHDC1Q9C0D6 1143 aaPredicted RBP19.15■□□□□ 0.66
TRIM3-213ENST00000533309 IGSF3O75054 1194 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 HSPD1P10809 573 aaKnown RBP19.14■□□□□ 0.66
TRIM3-213ENST00000533309 CYP7A1P22680 504 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 NECTIN1Q15223 517 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 MFSD14BQ5SR56 506 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 NAA16Q6N069 864 aaPredicted RBP19.14■□□□□ 0.66
TRIM3-213ENST00000533309 TBC1D22AQ8WUA7 517 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 IL17RAQ96F46 866 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 DSCC1Q9BVC3 393 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 BCS1LQ9Y276 419 aa19.14■□□□□ 0.66
TRIM3-213ENST00000533309 MBD4O95243 580 aa19.14■□□□□ 0.65
TRIM3-213ENST00000533309 LDHBP07195 334 aaKnown RBP19.14■□□□□ 0.65
TRIM3-213ENST00000533309 MCCP23508 829 aa19.14■□□□□ 0.65
TRIM3-213ENST00000533309 KCNQ5Q9NR82 932 aa19.14■□□□□ 0.65
TRIM3-213ENST00000533309 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
TRIM3-213ENST00000533309 LAMA4Q16363 1823 aa19.14■□□□□ 0.65
TRIM3-213ENST00000533309 G3V3G9 751 aa19.13■□□□□ 0.65
TRIM3-213ENST00000533309 NFKBIEO00221 500 aa19.13■□□□□ 0.65
TRIM3-213ENST00000533309 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
TRIM3-213ENST00000533309 TMED8Q6PL24 325 aaPredicted RBP19.13■□□□□ 0.65
TRIM3-213ENST00000533309 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
TRIM3-213ENST00000533309 MIGA1Q8NAN2 632 aa19.13■□□□□ 0.65
TRIM3-213ENST00000533309 KCNB2Q92953 911 aa19.13■□□□□ 0.65
TRIM3-213ENST00000533309 STRBPQ96SI9 672 aaKnown RBP19.13■□□□□ 0.65
TRIM3-213ENST00000533309 CDK5RAP2Q96SN8 1893 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 ANAPC15P60006 121 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 TTLL5Q6EMB2 1281 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 DZIP1Q86YF9 867 aaKnown RBP19.12■□□□□ 0.65
TRIM3-213ENST00000533309 RASEFQ8IZ41 740 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 LCORLQ8N3X6 602 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 AIDAQ96BJ3 306 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 VPS33BQ9H267 617 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 ARMT1Q9H993 441 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 ADAMTSL1Q8N6G6 1762 aa19.12■□□□□ 0.65
TRIM3-213ENST00000533309 YDJCA8MPS7 323 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 RIOK1Q9BRS2 568 aaKnown RBP19.11■□□□□ 0.65
TRIM3-213ENST00000533309 TAOK3Q9H2K8 898 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 DIXDC1Q155Q3 683 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 CREB3L3Q68CJ9 461 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 MXD3Q9BW11 206 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 SNX14Q9Y5W7 946 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
TRIM3-213ENST00000533309 UTRNP46939 3433 aa19.11■□□□□ 0.65
TRIM3-213ENST00000533309 BAZ2AQ9UIF9 1905 aaKnown RBP19.1■□□□□ 0.65
TRIM3-213ENST00000533309 SLC27A2O14975 620 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 IARSP41252 1262 aaKnown RBP19.1■□□□□ 0.65
TRIM3-213ENST00000533309 DACT2Q5SW24 774 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 STRIP1Q5VSL9 837 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 LARGE2Q8N3Y3 721 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 FBXW7Q969H0 707 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 SUGT1Q9Y2Z0 365 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 TAF6LQ9Y6J9 622 aa19.1■□□□□ 0.65
TRIM3-213ENST00000533309 LTBP3Q9NS15 1303 aa19.09■□□□□ 0.65
TRIM3-213ENST00000533309 MAGEB6P1A0A0J9YX57 407 aa19.09■□□□□ 0.65
TRIM3-213ENST00000533309 DYNLL1P63167 89 aaKnown RBP19.09■□□□□ 0.65
TRIM3-213ENST00000533309 SYT17Q9BSW7 474 aa19.09■□□□□ 0.65
TRIM3-213ENST00000533309 FKBP1AP62942 108 aaKnown RBP19.08■□□□□ 0.65
TRIM3-213ENST00000533309 EPB41L4AQ9HCS5 686 aaPredicted RBP19.08■□□□□ 0.65
TRIM3-213ENST00000533309 MROH7-TTC4A0A0A0MT08 1334 aa19.08■□□□□ 0.64
TRIM3-213ENST00000533309 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 PRKAB2O43741 272 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 SBF1O95248 1867 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 FGAP02671 866 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 GSTO1P78417 241 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 RABEP1Q15276 862 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 DICER1Q9UPY3 1922 aaKnown RBP19.07■□□□□ 0.64
TRIM3-213ENST00000533309 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 GSG1L2A8MUP6 293 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 CYP21A2P08686 494 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 RASSF7Q02833 373 aa19.07■□□□□ 0.64
TRIM3-213ENST00000533309 AATFQ9NY61 560 aaKnown RBP eCLIP19.07■□□□□ 0.64
TRIM3-213ENST00000533309 GAKO14976 1311 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 RPAP1Q9BWH6 1393 aaPredicted RBP19.06■□□□□ 0.64
TRIM3-213ENST00000533309 GNAT2P19087 354 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 PRELPP51888 382 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 TSGA10IPQ3SY00 556 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 RNF20Q5VTR2 975 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
TRIM3-213ENST00000533309 SLC4A4Q9Y6R1 1079 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 ZMYM6O95789 1325 aa19.06■□□□□ 0.64
TRIM3-213ENST00000533309 ECM29Q5VYK3 1845 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 PATL2C9JE40 543 aaKnown RBP19.05■□□□□ 0.64
TRIM3-213ENST00000533309 LDHCP07864 332 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 ALX1Q15699 326 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 ADCK5Q3MIX3 580 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 NIM1KQ8IY84 436 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 LAMB1P07942 1786 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 NAV1Q8NEY1 1877 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 TIAM2Q8IVF5 1701 aa19.05■□□□□ 0.64
TRIM3-213ENST00000533309 F8W031 263 aaPredicted RBP19.04■□□□□ 0.64
TRIM3-213ENST00000533309 ZKSCAN1P17029 563 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms