RNA–Protein interactions for RNA: ENST00000533168.1

CTSF-209, Transcript of cathepsin F, humanhuman

TSL 2

Gene CTSF, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-209ENST00000533168 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
CTSF-209ENST00000533168 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
CTSF-209ENST00000533168 TTF2Q9UNY4 1162 aaKnown RBP16.6■□□□□ 0.25
CTSF-209ENST00000533168 COLQQ9Y215 455 aaPredicted RBP16.6■□□□□ 0.25
CTSF-209ENST00000533168 ARAP2Q8WZ64 1704 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 CCL15-CCL14A0A0B4J2E2 113 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 VAMP4O75379 141 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
CTSF-209ENST00000533168 CCL15Q16663 113 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
CTSF-209ENST00000533168 TMEM106CQ9BVX2 250 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 ARHGAP39Q9C0H5 1083 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
CTSF-209ENST00000533168 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
CTSF-209ENST00000533168 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
CTSF-209ENST00000533168 SLC9C1Q4G0N8 1177 aa16.58■□□□□ 0.24
CTSF-209ENST00000533168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTSF-209ENST00000533168 FAM84BQ96KN1 310 aaPredicted RBP16.58■□□□□ 0.24
CTSF-209ENST00000533168 PUS3Q9BZE2 481 aaKnown RBP16.58■□□□□ 0.24
CTSF-209ENST00000533168 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
CTSF-209ENST00000533168 FANCIQ9NVI1 1328 aa16.58■□□□□ 0.24
CTSF-209ENST00000533168 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
CTSF-209ENST00000533168 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
CTSF-209ENST00000533168 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
CTSF-209ENST00000533168 IL16Q14005 1332 aa16.56■□□□□ 0.24
CTSF-209ENST00000533168 HIBADHP31937 336 aaKnown RBP16.56■□□□□ 0.24
CTSF-209ENST00000533168 CRKP46108 304 aa16.56■□□□□ 0.24
CTSF-209ENST00000533168 GTF2A2P52657 109 aa16.56■□□□□ 0.24
CTSF-209ENST00000533168 CACNB3P54284 484 aa16.56■□□□□ 0.24
CTSF-209ENST00000533168 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
CTSF-209ENST00000533168 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
CTSF-209ENST00000533168 IQSEC3Q9UPP2 1182 aaPredicted RBP16.56■□□□□ 0.24
CTSF-209ENST00000533168 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
CTSF-209ENST00000533168 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
CTSF-209ENST00000533168 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
CTSF-209ENST00000533168 H0YGN5 161 aa16.54■□□□□ 0.24
CTSF-209ENST00000533168 GRM8O00222 908 aa16.54■□□□□ 0.24
CTSF-209ENST00000533168 ECM2O94769 699 aaPredicted RBP16.54■□□□□ 0.24
CTSF-209ENST00000533168 UBE4AQ14139 1066 aa16.54■□□□□ 0.24
CTSF-209ENST00000533168 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
CTSF-209ENST00000533168 KAZALD1Q96I82 304 aa16.54■□□□□ 0.24
CTSF-209ENST00000533168 CSADQ9Y600 493 aa16.54■□□□□ 0.24
CTSF-209ENST00000533168 SNCAIPQ9Y6H5 919 aa16.54■□□□□ 0.24
CTSF-209ENST00000533168 SPDYE5A6NIY4 337 aa16.53■□□□□ 0.24
CTSF-209ENST00000533168 BTBD19C9JJ37 291 aa16.53■□□□□ 0.24
CTSF-209ENST00000533168 TLR2O60603 784 aa16.53■□□□□ 0.24
CTSF-209ENST00000533168 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
CTSF-209ENST00000533168 IRF6O14896 467 aa16.52■□□□□ 0.24
CTSF-209ENST00000533168 CTGFP29279 349 aa16.52■□□□□ 0.24
CTSF-209ENST00000533168 TNNI2P48788 182 aa16.52■□□□□ 0.24
CTSF-209ENST00000533168 LACTBP83111 547 aaPredicted RBP16.52■□□□□ 0.24
CTSF-209ENST00000533168 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
CTSF-209ENST00000533168 FBXO33Q7Z6M2 555 aa16.52■□□□□ 0.24
CTSF-209ENST00000533168 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
CTSF-209ENST00000533168 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
CTSF-209ENST00000533168 CHAF1AQ13111 956 aaPredicted RBP16.51■□□□□ 0.23
CTSF-209ENST00000533168 MTFR1Q15390 333 aa16.51■□□□□ 0.23
CTSF-209ENST00000533168 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
CTSF-209ENST00000533168 WRNIP1Q96S55 665 aa16.51■□□□□ 0.23
CTSF-209ENST00000533168 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
CTSF-209ENST00000533168 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
CTSF-209ENST00000533168 CETPP11597 493 aa16.5■□□□□ 0.23
CTSF-209ENST00000533168 ERO1BQ86YB8 467 aa16.5■□□□□ 0.23
CTSF-209ENST00000533168 SHISA4Q96DD7 197 aa16.5■□□□□ 0.23
CTSF-209ENST00000533168 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
CTSF-209ENST00000533168 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
CTSF-209ENST00000533168 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
CTSF-209ENST00000533168 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
CTSF-209ENST00000533168 COL6A3P12111 3177 aa16.49■□□□□ 0.23
CTSF-209ENST00000533168 A0A0C4DFX4 3053 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 HDLBPQ00341 1268 aaKnown RBP16.48■□□□□ 0.23
CTSF-209ENST00000533168 PPIL2Q13356 520 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 SNAPC2Q13487 334 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 KIF22Q14807 665 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 C17orf99Q6UX52 265 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 MIGA2Q7L4E1 593 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 TRIM47Q96LD4 638 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 ZDHHC15Q96MV8 337 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
CTSF-209ENST00000533168 ALDH1L1O75891 902 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 INPP5BP32019 993 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 BCAMP50895 628 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
CTSF-209ENST00000533168 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 FAM83AQ86UY5 434 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 WDR63Q8IWG1 891 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
CTSF-209ENST00000533168 SRCIN1Q9C0H9 1055 aa16.47■□□□□ 0.23
CTSF-209ENST00000533168 ZCCHC17Q9NP64 241 aaKnown RBP16.47■□□□□ 0.23
CTSF-209ENST00000533168 MROH5Q6ZUA9 1318 aa16.46■□□□□ 0.23
CTSF-209ENST00000533168 KLHDC4Q8TBB5 520 aa16.46■□□□□ 0.23
CTSF-209ENST00000533168 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
CTSF-209ENST00000533168 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
CTSF-209ENST00000533168 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
CTSF-209ENST00000533168 FRAT2O75474 233 aaPredicted RBP16.45■□□□□ 0.22
CTSF-209ENST00000533168 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
CTSF-209ENST00000533168 GNRH1P01148 92 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms