RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
TRAPPC4-211ENST00000533012 DZIP1Q86YF9 867 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-211ENST00000533012 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
TRAPPC4-211ENST00000533012 MYOZ2Q9NPC6 264 aa13.67□□□□□ -0.22
TRAPPC4-211ENST00000533012 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
TRAPPC4-211ENST00000533012 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-211ENST00000533012 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 GOLIM4O00461 696 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 MAP3K12Q12852 859 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 DLGAP5Q15398 846 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 EAPPQ56P03 285 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 TEKT1Q969V4 418 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 ANTXR1Q9H6X2 564 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 PAG1Q9NWQ8 432 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 NDUFB9Q9Y6M9 179 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
TRAPPC4-211ENST00000533012 SCN9AQ15858 1988 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 LDHCP07864 332 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 CRKP46108 304 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 GSTO1P78417 241 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 MECOMQ03112 1051 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 KIF4BQ2VIQ3 1234 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 CFAP100Q494V2 611 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 HHIPL2Q6UWX4 724 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 MTMR14Q8NCE2 650 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 OSBPL3Q9H4L5 887 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
TRAPPC4-211ENST00000533012 MYO1BO43795 1136 aa13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 PDE4AP27815 886 aa13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZC3H15Q8WU90 426 aaKnown RBP13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 AOX1Q06278 1338 aa13.64□□□□□ -0.23
TRAPPC4-211ENST00000533012 WNT10BO00744 389 aa13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 KIF3CO14782 793 aa13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 MAP4K4O95819 1239 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 EGFRP00533 1210 aa13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 DIXDC1Q155Q3 683 aa13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 NAA16Q6N069 864 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 TMED8Q6PL24 325 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 LDHDQ86WU2 507 aa13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZDHHC15Q96MV8 337 aa13.63□□□□□ -0.23
TRAPPC4-211ENST00000533012 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 NBPF9Q3BBW0 867 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 MAGEB6Q8N7X4 407 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 DCPSQ96C86 337 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 PGAP2Q9UHJ9 254 aa13.62□□□□□ -0.23
TRAPPC4-211ENST00000533012 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 TOMM70O94826 608 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 BAG3O95817 575 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 CYP7A1P22680 504 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 APOBEC3HQ6NTF7 200 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 KBTBD3Q8NAB2 608 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 EVI5LQ96CN4 794 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 NOL10Q9BSC4 688 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 PCDHAC2Q9Y5I4 1007 aa13.61□□□□□ -0.23
TRAPPC4-211ENST00000533012 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 ANGEL2Q5VTE6 544 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 CNTROBQ8N137 903 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 TDRD3Q9H7E2 651 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 GAKO14976 1311 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 SCN4AP35499 1836 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 PSME4Q14997 1843 aa13.6□□□□□ -0.23
TRAPPC4-211ENST00000533012 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 PDE6AP16499 860 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 RBM46Q8TBY0 533 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 FSD1Q9BTV5 496 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 TMOD2Q9NZR1 351 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
TRAPPC4-211ENST00000533012 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 ZFYP08048 801 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 ADD2P35612 726 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 BTDP43251 543 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 RGS3P49796 1198 aa13.58□□□□□ -0.24
TRAPPC4-211ENST00000533012 PPP4CP60510 307 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms