RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
CHMP4A-206ENST00000533011 PTPN18Q99952 460 aa12.77□□□□□ -0.37
CHMP4A-206ENST00000533011 BCAR3O75815 825 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 GJB1P08034 283 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 HOXD10P28358 340 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 UBE2Q1Q7Z7E8 422 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 COL25A1Q9BXS0 654 aaPredicted RBP12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 COA1Q9GZY4 146 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 PSME4Q14997 1843 aa12.76□□□□□ -0.37
CHMP4A-206ENST00000533011 LAMB1P07942 1786 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 BMP8BP34820 402 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 GTF2A2P52657 109 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 CHRNDQ07001 517 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 SH3TC2Q8TF17 1288 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 FRAT1Q92837 279 aaPredicted RBP12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 ZNF594Q96JF6 807 aaPredicted RBP12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
CHMP4A-206ENST00000533011 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 MYO1BO43795 1136 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 EVI5O60447 810 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 SASH1O94885 1247 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 CAP1Q01518 475 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
CHMP4A-206ENST00000533011 SOX1O00570 391 aaPredicted RBP12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 MYCP01106 439 aaPredicted RBP12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 UBTFL1P0CB47 393 aaPredicted RBP12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 TRIM27P14373 513 aa12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 KCNJ4P48050 445 aa12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 TTLL5Q6EMB2 1281 aa12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
CHMP4A-206ENST00000533011 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 TLR2O60603 784 aa12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 TAF5LO75529 589 aa12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 USP2O75604 605 aaPredicted RBP12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 UBXN2AP68543 259 aa12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
CHMP4A-206ENST00000533011 A0A1B0GUL6 1792 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 LAMA3Q16787 3333 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 GRK4P32298 578 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 GJA5P36382 358 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 LRIT3Q3SXY7 679 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 FBXW7Q969H0 707 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 OPTNQ96CV9 577 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 PRDM6Q9NQX0 595 aa12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
CHMP4A-206ENST00000533011 CCL15-CCL14A0A0B4J2E2 113 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 PLIN1O60240 522 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 GNAI3P08754 354 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 CCL15Q16663 113 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 C15orf52Q6ZUT6 534 aaKnown RBP12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 KIAA0825Q8IV33 1275 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 MEIS3Q99687 375 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 PUS3Q9BZE2 481 aaKnown RBP12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 SRRDQ9UH36 339 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 FZD1Q9UP38 647 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
CHMP4A-206ENST00000533011 MROH5Q6ZUA9 1318 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 SNAP23O00161 211 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 CCL5P13501 91 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 KLRK1P26718 216 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 TNFAIP1Q13829 316 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 MTFR1Q15390 333 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 BRI3BPQ8WY22 251 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 MXD3Q9BW11 206 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
CHMP4A-206ENST00000533011 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
CHMP4A-206ENST00000533011 SGPL1O95470 568 aa12.68□□□□□ -0.38
CHMP4A-206ENST00000533011 CETPP11597 493 aa12.68□□□□□ -0.38
CHMP4A-206ENST00000533011 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
CHMP4A-206ENST00000533011 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
CHMP4A-206ENST00000533011 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
CHMP4A-206ENST00000533011 NBPF12Q5TAG4 269 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms