RNA–Protein interactions for RNA: ENST00000533000.5

UBXN1-214, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-214ENST00000533000 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
UBXN1-214ENST00000533000 ZNF333Q96JL9 665 aa17.57■□□□□ 0.4
UBXN1-214ENST00000533000 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
UBXN1-214ENST00000533000 CNNM1Q9NRU3 951 aa17.57■□□□□ 0.4
UBXN1-214ENST00000533000 SERPINA10Q9UK55 444 aa17.57■□□□□ 0.4
UBXN1-214ENST00000533000 GRM8O00222 908 aa17.56■□□□□ 0.4
UBXN1-214ENST00000533000 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
UBXN1-214ENST00000533000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.56■□□□□ 0.4
UBXN1-214ENST00000533000 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
UBXN1-214ENST00000533000 PTCH2Q9Y6C5 1203 aa17.56■□□□□ 0.4
UBXN1-214ENST00000533000 CCL15-CCL14A0A0B4J2E2 113 aa17.55■□□□□ 0.4
UBXN1-214ENST00000533000 HIBADHP31937 336 aaKnown RBP17.55■□□□□ 0.4
UBXN1-214ENST00000533000 CRKP46108 304 aa17.55■□□□□ 0.4
UBXN1-214ENST00000533000 MAP3K9P80192 1104 aa17.55■□□□□ 0.4
UBXN1-214ENST00000533000 UBE4AQ14139 1066 aa17.55■□□□□ 0.4
UBXN1-214ENST00000533000 CCL15Q16663 113 aa17.55■□□□□ 0.4
UBXN1-214ENST00000533000 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
UBXN1-214ENST00000533000 CACNB3P54284 484 aa17.54■□□□□ 0.4
UBXN1-214ENST00000533000 TNFAIP1Q13829 316 aa17.54■□□□□ 0.4
UBXN1-214ENST00000533000 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-214ENST00000533000 OTUD5Q96G74 571 aa17.54■□□□□ 0.4
UBXN1-214ENST00000533000 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
UBXN1-214ENST00000533000 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
UBXN1-214ENST00000533000 IQSEC3Q9UPP2 1182 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-214ENST00000533000 FXR1P51114 621 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBXN1-214ENST00000533000 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
UBXN1-214ENST00000533000 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
UBXN1-214ENST00000533000 MYCP01106 439 aaPredicted RBP17.52■□□□□ 0.4
UBXN1-214ENST00000533000 GTF2A2P52657 109 aa17.52■□□□□ 0.4
UBXN1-214ENST00000533000 FBXO33Q7Z6M2 555 aa17.52■□□□□ 0.4
UBXN1-214ENST00000533000 WDR63Q8IWG1 891 aa17.52■□□□□ 0.4
UBXN1-214ENST00000533000 ZFYVE28Q9HCC9 887 aa17.52■□□□□ 0.4
UBXN1-214ENST00000533000 SNCAIPQ9Y6H5 919 aa17.52■□□□□ 0.4
UBXN1-214ENST00000533000 SLC9C1Q4G0N8 1177 aa17.51■□□□□ 0.39
UBXN1-214ENST00000533000 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
UBXN1-214ENST00000533000 TMEM106CQ9BVX2 250 aa17.51■□□□□ 0.39
UBXN1-214ENST00000533000 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
UBXN1-214ENST00000533000 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
UBXN1-214ENST00000533000 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
UBXN1-214ENST00000533000 BTBD19C9JJ37 291 aa17.5■□□□□ 0.39
UBXN1-214ENST00000533000 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
UBXN1-214ENST00000533000 NBPF7P0C2Y1 421 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-214ENST00000533000 CHAF1AQ13111 956 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-214ENST00000533000 LRRC24Q50LG9 513 aa17.5■□□□□ 0.39
UBXN1-214ENST00000533000 SLC4A10Q6U841 1118 aa17.5■□□□□ 0.39
UBXN1-214ENST00000533000 ZKSCAN4Q969J2 545 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-214ENST00000533000 CSADQ9Y600 493 aa17.5■□□□□ 0.39
UBXN1-214ENST00000533000 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
UBXN1-214ENST00000533000 TNNI2P48788 182 aa17.49■□□□□ 0.39
UBXN1-214ENST00000533000 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 IRF6O14896 467 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 TLR2O60603 784 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-214ENST00000533000 CTGFP29279 349 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 APOBEC3HQ6NTF7 200 aaKnown RBP17.48■□□□□ 0.39
UBXN1-214ENST00000533000 VGLL2Q8N8G2 317 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 SRCIN1Q9C0H9 1055 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 CACNA1FO60840 1977 aa17.48■□□□□ 0.39
UBXN1-214ENST00000533000 SZT2Q5T011 3432 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 BCAMP50895 628 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-214ENST00000533000 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
UBXN1-214ENST00000533000 NBPF11Q86T75 865 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 ANKRD44Q8N8A2 993 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 BICC1Q9H694 974 aaKnown RBP17.47■□□□□ 0.39
UBXN1-214ENST00000533000 UTYO14607 1347 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
UBXN1-214ENST00000533000 H0YGN5 161 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 CETPP11597 493 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 ARHGEF6Q15052 776 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 RABL6Q3YEC7 729 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-214ENST00000533000 ERO1BQ86YB8 467 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 KLHDC4Q8TBB5 520 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 TEKT1Q969V4 418 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 ZDHHC15Q96MV8 337 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 CEP290O15078 2479 aa17.46■□□□□ 0.39
UBXN1-214ENST00000533000 INPP5BP32019 993 aa17.45■□□□□ 0.38
UBXN1-214ENST00000533000 C17orf99Q6UX52 265 aa17.45■□□□□ 0.38
UBXN1-214ENST00000533000 MIGA2Q7L4E1 593 aa17.45■□□□□ 0.38
UBXN1-214ENST00000533000 MRS2Q9HD23 443 aa17.45■□□□□ 0.38
UBXN1-214ENST00000533000 PDE8BO95263 885 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 PPIL2Q13356 520 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 SNAPC2Q13487 334 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 MTFR1Q15390 333 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 FAM83AQ86UY5 434 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 VPS37DQ86XT2 251 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 TBC1D22AQ8WUA7 517 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
UBXN1-214ENST00000533000 ZCCHC17Q9NP64 241 aaKnown RBP17.44■□□□□ 0.38
UBXN1-214ENST00000533000 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
UBXN1-214ENST00000533000 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
UBXN1-214ENST00000533000 MOGSQ13724 837 aa17.43■□□□□ 0.38
UBXN1-214ENST00000533000 FKBP1CQ5VVH2 108 aa17.43■□□□□ 0.38
UBXN1-214ENST00000533000 CPA4Q9UI42 421 aa17.43■□□□□ 0.38
UBXN1-214ENST00000533000 TRIOBPQ9H2D6 2365 aa17.42■□□□□ 0.38
UBXN1-214ENST00000533000 FGFR2P21802 821 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms