RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 JCADQ9P266 1359 aa6.91□□□□□ -1.3
ATPAF1-210ENST00000532925 ANKRD36CQ5JPF3 1778 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 ITGB4P16144 1822 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 ANXA1P04083 346 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 IFIT2P09913 472 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 GRM5P41594 1212 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 CASP7P55210 303 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 G3BP1Q13283 466 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 NR5A1Q13285 461 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 SLC39A6Q13433 755 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 OS9Q13438 667 aaPredicted RBP6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 DIXDC1Q155Q3 683 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 CWF19L2Q2TBE0 894 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 TOM1L2Q6ZVM7 507 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 COPS6Q7L5N1 327 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 TNPO1Q92973 898 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 TM6SF1Q9BZW5 370 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 BICC1Q9H694 974 aaKnown RBP6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 IL1RAPL2Q9NP60 686 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 GPR108Q9NPR9 543 aa6.9□□□□□ -1.3
ATPAF1-210ENST00000532925 COL16A1Q07092 1604 aaPredicted RBP6.9□□□□□ -1.31
ATPAF1-210ENST00000532925 FSD2A1L4K1 749 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 PRAMEF22A3QJZ6 481 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 SOCS7O14512 581 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 TRAK2O60296 914 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 BMP2P12643 396 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 LINC00528Q8N1L1 170 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 CCDC191Q8NCU4 936 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 TSC1Q92574 1164 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 RILPL2Q969X0 211 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 LSG1Q9H089 658 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 USP16Q9Y5T5 823 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 ZNF831Q5JPB2 1677 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 NWD2Q9ULI1 1742 aa6.89□□□□□ -1.31
ATPAF1-210ENST00000532925 MYH3P11055 1940 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 NRAPQ86VF7 1730 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 RREB1Q92766 1687 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 ROBO1Q9Y6N7 1651 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 ABCC12Q96J65 1359 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 MED23Q9ULK4 1368 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 H7C1W4 665 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 SASH1O94885 1247 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 RFX5P48382 616 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 KLHL40Q2TBA0 621 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 PRPF38BQ5VTL8 546 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 KIAA1211Q6ZU35 1233 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 BPHLQ86WA6 291 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 UNC5CLQ8IV45 518 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 MEIOBQ8N635 442 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 TMX3Q96JJ7 454 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 MYD88Q99836 296 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 CDCA7Q9BWT1 371 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 PLA2G12BQ9BX93 195 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 DIAPH3Q9NSV4 1193 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 HMG20BQ9P0W2 317 aa6.88□□□□□ -1.31
ATPAF1-210ENST00000532925 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 CIAO1O76071 339 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 ATP5JP18859 108 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 FSHRP23945 695 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 NEK4P51957 841 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 PTPN12Q05209 780 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 AIMP1Q12904 312 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 AACSQ86V21 672 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 TTC14Q96N46 770 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 ALDH8A1Q9H2A2 487 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 CWC25Q9NXE8 425 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 DNMT3LQ9UJW3 386 aa6.87□□□□□ -1.31
ATPAF1-210ENST00000532925 BCL9O00512 1426 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 RPAP1Q9BWH6 1393 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 CCDC171Q6TFL3 1326 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 A0A087WZG4 1122 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 GOLGA6L3A6NEY3 463 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 TRIM66O15016 1216 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 UPP2O95045 317 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 BAG4O95429 457 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 BRD1O95696 1058 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 MYL6BP14649 208 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 MRE11P49959 708 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 QPCTQ16769 361 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 HSP90AB3PQ58FF7 597 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 NBPF14Q5TI25 921 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 RNF20Q5VTR2 975 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 NBPF10Q6P3W6 841 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 NBPF15Q8N660 670 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 EAF2Q96CJ1 260 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 ZSCAN31Q96LW9 406 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 ISCA1Q9BUE6 129 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 C1QTNF2Q9BXJ5 285 aa6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 PA2G4Q9UQ80 394 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 THRAP3Q9Y2W1 955 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-210ENST00000532925 SNX14Q9Y5W7 946 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms