RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
AP004550.1-201ENST00000532652 LAMA3Q16787 3333 aa16.09■□□□□ 0.17
AP004550.1-201ENST00000532652 FAM205AQ6ZU69 1335 aa16.09■□□□□ 0.17
AP004550.1-201ENST00000532652 A0A0C4DFX4 3053 aa16.09■□□□□ 0.17
AP004550.1-201ENST00000532652 MAP3K9P80192 1104 aa16.08■□□□□ 0.16
AP004550.1-201ENST00000532652 FOXO4P98177 505 aa16.08■□□□□ 0.16
AP004550.1-201ENST00000532652 VGLL4Q14135 290 aa16.08■□□□□ 0.16
AP004550.1-201ENST00000532652 FAM43AQ8N2R8 423 aa16.08■□□□□ 0.16
AP004550.1-201ENST00000532652 PRKRIP1Q9H875 184 aaPredicted RBP16.08■□□□□ 0.16
AP004550.1-201ENST00000532652 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
AP004550.1-201ENST00000532652 H0YGN5 161 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 PLIN1O60240 522 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 GTF2A2P52657 109 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 SH3TC2Q8TF17 1288 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 OTUD5Q96G74 571 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 TMEM39BQ9GZU3 492 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 SERPINA10Q9UK55 444 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
AP004550.1-201ENST00000532652 TCP10L2B9ZVM9 353 aa16.06■□□□□ 0.16
AP004550.1-201ENST00000532652 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
AP004550.1-201ENST00000532652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
AP004550.1-201ENST00000532652 CSADQ9Y600 493 aa16.06■□□□□ 0.16
AP004550.1-201ENST00000532652 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
AP004550.1-201ENST00000532652 TDRD7Q8NHU6 1098 aaKnown RBP16.05■□□□□ 0.16
AP004550.1-201ENST00000532652 ARHGAP39Q9C0H5 1083 aa16.05■□□□□ 0.16
AP004550.1-201ENST00000532652 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
AP004550.1-201ENST00000532652 DOCK2Q92608 1830 aa16.05■□□□□ 0.16
AP004550.1-201ENST00000532652 TLR2O60603 784 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 CRKP46108 304 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 TNNI2P48788 182 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 CCDC57Q2TAC2 916 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 LDHAL6AQ6ZMR3 332 aa16.04■□□□□ 0.16
AP004550.1-201ENST00000532652 SPDYE5A6NIY4 337 aa16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 WDHD1O75717 1129 aaPredicted RBP16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 GYG1P46976 350 aa16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 KIF22Q14807 665 aa16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 PHIPQ8WWQ0 1821 aa16.03■□□□□ 0.16
AP004550.1-201ENST00000532652 BTBD19C9JJ37 291 aa16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 CETPP11597 493 aa16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 UBE4AQ14139 1066 aa16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 CCDC27Q2M243 656 aa16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 WWC1Q8IX03 1113 aa16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 SNCAIPQ9Y6H5 919 aa16.02■□□□□ 0.16
AP004550.1-201ENST00000532652 F6X3S4 739 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 GNRH1P01148 92 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 CACNB3P54284 484 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 MTFR1Q15390 333 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 GRIK5Q16478 980 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 ERO1BQ86YB8 467 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 SHISA4Q96DD7 197 aa16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 ZCCHC17Q9NP64 241 aaKnown RBP16.01■□□□□ 0.15
AP004550.1-201ENST00000532652 IRF6O14896 467 aa16■□□□□ 0.15
AP004550.1-201ENST00000532652 PRMT2P55345 433 aa16■□□□□ 0.15
AP004550.1-201ENST00000532652 DPF3Q92784 378 aa16■□□□□ 0.15
AP004550.1-201ENST00000532652 ZKSCAN4Q969J2 545 aaPredicted RBP16■□□□□ 0.15
AP004550.1-201ENST00000532652 WRNIP1Q96S55 665 aa16■□□□□ 0.15
AP004550.1-201ENST00000532652 IL16Q14005 1332 aa15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 GRM8O00222 908 aa15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 CTGFP29279 349 aa15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 RBM27Q9P2N5 1060 aaKnown RBP15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
AP004550.1-201ENST00000532652 ATAD5Q96QE3 1844 aa15.98■□□□□ 0.15
AP004550.1-201ENST00000532652 VAMP4O75379 141 aa15.98■□□□□ 0.15
AP004550.1-201ENST00000532652 PPIL2Q13356 520 aa15.98■□□□□ 0.15
AP004550.1-201ENST00000532652 DOCK1Q14185 1865 aa15.98■□□□□ 0.15
AP004550.1-201ENST00000532652 C17orf99Q6UX52 265 aa15.98■□□□□ 0.15
AP004550.1-201ENST00000532652 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 PSMC4P43686 418 aa15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 HDLBPQ00341 1268 aaKnown RBP15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 TEKT1Q969V4 418 aa15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 TRIM47Q96LD4 638 aa15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 SRRDQ9UH36 339 aa15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 CPA4Q9UI42 421 aa15.97■□□□□ 0.15
AP004550.1-201ENST00000532652 OSBPP22059 807 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 FBXO33Q7Z6M2 555 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 VPS37DQ86XT2 251 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 NKX2-3Q8TAU0 364 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 RAET1EQ8TD07 263 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 TBC1D22AQ8WUA7 517 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 C9orf78Q9NZ63 289 aaPredicted RBP15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
AP004550.1-201ENST00000532652 GRK4P32298 578 aa15.95■□□□□ 0.14
AP004550.1-201ENST00000532652 PPATQ06203 517 aa15.95■□□□□ 0.14
AP004550.1-201ENST00000532652 DCAF15Q66K64 600 aa15.95■□□□□ 0.14
AP004550.1-201ENST00000532652 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
AP004550.1-201ENST00000532652 HOOK2Q96ED9 719 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms