RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ANKRD18AQ8IVF6 992 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 GOLGA1Q92805 767 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 PDGFDQ9GZP0 370 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 BOLA2Q9H3K6 86 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 ZSWIM4Q9H7M6 989 aa7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.8□□□□□ -1.16
TGFBR3-209ENST00000532540 A0A087WUV0 522 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 GOLGA6L9A6NEM1 432 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 DYDC1Q8WWB3 177 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 ST7Q9NRC1 585 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 COL5A2P05997 1499 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 MED1Q15648 1581 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 BRD1O95696 1058 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 CLCN6P51797 869 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 BARGINQ6ZT62 677 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 LINS1Q8NG48 757 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 DNAJC25Q9H1X3 360 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 RNF216Q9NWF9 866 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 ST5P78524 1137 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 RBM26Q5T8P6 1007 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 CHAMP1Q96JM3 812 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 GPR101Q96P66 508 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 CARD6Q9BX69 1037 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 DONSONQ9NYP3 566 aa7.79□□□□□ -1.16
TGFBR3-209ENST00000532540 PXDNQ92626 1479 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 CPDO75976 1380 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 EIF3CLB5ME19 914 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 TULP2O00295 520 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 IDH1O75874 414 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 GCKP35557 465 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 TIMM10P62072 90 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 MAP2K1Q02750 393 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 TTC22Q5TAA0 569 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 CAGE1Q8TC20 777 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 FAM212AQ96EL1 285 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 SUCLG2Q96I99 432 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 ZSCAN31Q96LW9 406 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 EIF3CQ99613 913 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 SPATS2LQ9NUQ6 558 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 HEG1Q9ULI3 1381 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 ANKRD18BA2A2Z9 1011 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 CTAGE5O15320 804 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 IPO7O95373 1038 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 CYP19A1P11511 503 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 MCM3P25205 808 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 LIG3P49916 1009 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 NEDD9Q14511 834 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 STX1AQ16623 288 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 KIF4BQ2VIQ3 1234 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 PLBD2Q8NHP8 589 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 SEC31BQ9NQW1 1179 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 RBBP5Q15291 538 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 SMARCE1Q969G3 411 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 GPATCH3Q96I76 525 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 METTL22Q9BUU2 404 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 LRRC4BQ9NT99 713 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 DACT1Q9NYF0 836 aa7.78□□□□□ -1.16
TGFBR3-209ENST00000532540 SH3TC1Q8TE82 1336 aa7.77□□□□□ -1.16
TGFBR3-209ENST00000532540 PNMA6EA0A0J9YXQ4 647 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 DCAF8L1A6NGE4 600 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 SETSIPP0DME0 302 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CHRM1P11229 460 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CEBPZQ03701 1054 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 GPR162Q16538 588 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 OLFM4Q6UX06 510 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CEP112Q8N8E3 955 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CFAP45Q9UL16 551 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 GOLGB1Q14789 3259 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 F13A1P00488 732 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 AKAP17AQ02040 695 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 PPP2R3AQ06190 1150 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 TRDNQ13061 729 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CFAP100Q494V2 611 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 ERFEQ4G0M1 354 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 TBC1D9BQ66K14 1250 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC83Q8IWF9 413 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 RSRC1Q96IZ7 334 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 LIMCH1Q9UPQ0 1083 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 NALCNQ8IZF0 1738 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 GOLGA6L10A6NI86 522 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 KIF5CO60282 957 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 SERPINB2P05120 415 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 TCIRG1Q13488 830 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 GCKRQ14397 625 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 LRRFIP1Q32MZ4 808 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 TTC39AQ5SRH9 613 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CCDC12Q8WUD4 166 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 CBX8Q9HC52 389 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 ROBO1Q9Y6N7 1651 aa7.77□□□□□ -1.17
TGFBR3-209ENST00000532540 HMGB1P09429 215 aaKnown RBP7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 ITGA6P23229 1130 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 CHRNA5P30532 468 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 DNM1Q05193 864 aaKnown RBP7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 SUSD4Q5VX71 490 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 TADA2BQ86TJ2 420 aa7.76□□□□□ -1.17
TGFBR3-209ENST00000532540 GPR161Q8N6U8 529 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms