RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 NECTIN1Q15223 517 aa26.36■■□□□ 1.81
PACSIN3-209ENST00000532457 RBM8AQ9Y5S9 174 aaKnown RBP26.36■■□□□ 1.81
PACSIN3-209ENST00000532457 GRIK5Q16478 980 aa26.35■■□□□ 1.81
PACSIN3-209ENST00000532457 DOK7Q18PE1 504 aa26.35■■□□□ 1.81
PACSIN3-209ENST00000532457 ADGRA1Q86SQ6 560 aa26.35■■□□□ 1.81
PACSIN3-209ENST00000532457 IPO9Q96P70 1041 aaKnown RBP26.35■■□□□ 1.81
PACSIN3-209ENST00000532457 MYH13Q9UKX3 1938 aa26.35■■□□□ 1.81
PACSIN3-209ENST00000532457 RAI14Q9P0K7 980 aa26.35■■□□□ 1.81
PACSIN3-209ENST00000532457 CHD4Q14839 1912 aa26.34■■□□□ 1.81
PACSIN3-209ENST00000532457 PRDX5P30044 214 aa26.34■■□□□ 1.81
PACSIN3-209ENST00000532457 RNF181Q9P0P0 153 aa26.34■■□□□ 1.81
PACSIN3-209ENST00000532457 SBF1O95248 1867 aa26.33■■□□□ 1.81
PACSIN3-209ENST00000532457 HSPD1P10809 573 aaKnown RBP26.33■■□□□ 1.81
PACSIN3-209ENST00000532457 NIM1KQ8IY84 436 aa26.33■■□□□ 1.81
PACSIN3-209ENST00000532457 COA1Q9GZY4 146 aa26.33■■□□□ 1.81
PACSIN3-209ENST00000532457 GPAA1O43292 621 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 C9orf131Q5VYM1 1079 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 KCNB2Q92953 911 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 IL17RAQ96F46 866 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 SNX14Q9Y5W7 946 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 CCDC88AQ3V6T2 1871 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 PRELPP51888 382 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 TAF6LQ9Y6J9 622 aa26.32■■□□□ 1.8
PACSIN3-209ENST00000532457 SALL1Q9NSC2 1324 aa26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 MCCP23508 829 aa26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 SLC4A3P48751 1232 aa26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 MECOMQ03112 1051 aa26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 ERICH6Q7L0X2 663 aa26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 WDR66Q8TBY9 1149 aa26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 NSUN4Q96CB9 384 aaKnown RBP26.31■■□□□ 1.8
PACSIN3-209ENST00000532457 CYP7A1P22680 504 aa26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 CREB3L3Q68CJ9 461 aa26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 PODNQ7Z5L7 613 aa26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 STRBPQ96SI9 672 aaKnown RBP26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 KCNQ5Q9NR82 932 aa26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 DICER1Q9UPY3 1922 aaKnown RBP26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 DSCC1Q9BVC3 393 aa26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 DBNDD1Q9H9R9 158 aa26.3■■□□□ 1.8
PACSIN3-209ENST00000532457 SLC27A2O14975 620 aa26.29■■□□□ 1.8
PACSIN3-209ENST00000532457 CD2BP2O95400 341 aaKnown RBP26.29■■□□□ 1.8
PACSIN3-209ENST00000532457 ANAPC15P60006 121 aa26.29■■□□□ 1.8
PACSIN3-209ENST00000532457 ZNRF3Q9ULT6 936 aa26.29■■□□□ 1.8
PACSIN3-209ENST00000532457 ECE2O60344 883 aa26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 GTF2IP78347 998 aa26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 MIGA1Q8NAN2 632 aa26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 FAM205AQ6ZU69 1335 aa26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 ZC3H4Q9UPT8 1303 aaKnown RBP26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 DDRGK1Q96HY6 314 aa26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 ARMT1Q9H993 441 aa26.28■■□□□ 1.8
PACSIN3-209ENST00000532457 MBD4O95243 580 aa26.27■■□□□ 1.8
PACSIN3-209ENST00000532457 ADCK5Q3MIX3 580 aa26.27■■□□□ 1.8
PACSIN3-209ENST00000532457 TTLL5Q6EMB2 1281 aa26.27■■□□□ 1.8
PACSIN3-209ENST00000532457 NAA16Q6N069 864 aaPredicted RBP26.27■■□□□ 1.8
PACSIN3-209ENST00000532457 LCORLQ8N3X6 602 aa26.27■■□□□ 1.8
PACSIN3-209ENST00000532457 TBC1D2Q9BYX2 928 aa26.27■■□□□ 1.8
PACSIN3-209ENST00000532457 COL9A3Q14050 684 aaPredicted RBP26.26■■□□□ 1.79
PACSIN3-209ENST00000532457 RABEP1Q15276 862 aa26.26■■□□□ 1.79
PACSIN3-209ENST00000532457 U3KPZ7 1027 aaPredicted RBP26.26■■□□□ 1.79
PACSIN3-209ENST00000532457 EIF6P56537 245 aaKnown RBP26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 SPTY2D1Q68D10 685 aaPredicted RBP26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 AIDAQ96BJ3 306 aa26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 MXD3Q9BW11 206 aa26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 FZD9O00144 591 aa26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 PRKAB2O43741 272 aa26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 FGAP02671 866 aa26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 LDHBP07195 334 aaKnown RBP26.25■■□□□ 1.79
PACSIN3-209ENST00000532457 CYP21A2P08686 494 aa26.24■■□□□ 1.79
PACSIN3-209ENST00000532457 DYNLL1P63167 89 aaKnown RBP26.24■■□□□ 1.79
PACSIN3-209ENST00000532457 MFSD14BQ5SR56 506 aa26.24■■□□□ 1.79
PACSIN3-209ENST00000532457 ZGPATQ8N5A5 531 aaKnown RBP26.24■■□□□ 1.79
PACSIN3-209ENST00000532457 CERS5Q8N5B7 392 aa26.24■■□□□ 1.79
PACSIN3-209ENST00000532457 RIOK1Q9BRS2 568 aaKnown RBP26.24■■□□□ 1.79
PACSIN3-209ENST00000532457 COL4A5P29400 1685 aa26.23■■□□□ 1.79
PACSIN3-209ENST00000532457 DIXDC1Q155Q3 683 aa26.22■■□□□ 1.79
PACSIN3-209ENST00000532457 TSGA10IPQ3SY00 556 aa26.22■■□□□ 1.79
PACSIN3-209ENST00000532457 SNX21Q969T3 373 aa26.22■■□□□ 1.79
PACSIN3-209ENST00000532457 UPF3BQ9BZI7 483 aaKnown RBP26.22■■□□□ 1.79
PACSIN3-209ENST00000532457 MAGEB6P1A0A0J9YX57 407 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 YDJCA8MPS7 323 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 GSG1L2A8MUP6 293 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 PATL2C9JE40 543 aaKnown RBP26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 CPA1P15085 419 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 TNIP1Q15025 636 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 DPY19L2Q6NUT2 758 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 FBXW7Q969H0 707 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 TIAM2Q8IVF5 1701 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 NEK4P51957 841 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 DZIP1Q86YF9 867 aaKnown RBP26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 TBC1D22AQ8WUA7 517 aa26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 EPB41L4AQ9HCS5 686 aaPredicted RBP26.21■■□□□ 1.79
PACSIN3-209ENST00000532457 SCN9AQ15858 1988 aa26.2■■□□□ 1.78
PACSIN3-209ENST00000532457 USP17L3A6NCW0 530 aa26.2■■□□□ 1.78
PACSIN3-209ENST00000532457 USP17L4A6NCW7 530 aa26.2■■□□□ 1.78
PACSIN3-209ENST00000532457 CIAPIN1Q6FI81 312 aa26.2■■□□□ 1.78
PACSIN3-209ENST00000532457 USP17L1Q7RTZ2 530 aa26.2■■□□□ 1.78
PACSIN3-209ENST00000532457 ZKSCAN1P17029 563 aaPredicted RBP26.19■■□□□ 1.78
PACSIN3-209ENST00000532457 CXCL9Q07325 125 aa26.19■■□□□ 1.78
PACSIN3-209ENST00000532457 STRIP1Q5VSL9 837 aa26.19■■□□□ 1.78
PACSIN3-209ENST00000532457 RAD17O75943 681 aa26.18■■□□□ 1.78
PACSIN3-209ENST00000532457 APPP05067 770 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms