RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 MESP2Q0VG99 397 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 LRRN4CLQ8ND94 238 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 NXPE3Q969Y0 559 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 OSMRQ99650 979 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 GGNBP2Q9H3C7 697 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 LATS2Q9NRM7 1088 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 C1GALT1Q9NS00 363 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 SLAIN2Q9P270 581 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 SLC5A6Q9Y289 635 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 FNDC3AQ9Y2H6 1198 aaKnown RBP3.66□□□□□ -1.82
RC3H1-206ENST00000531594 CES1P23141 567 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 ARL4DP49703 201 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 GSTM4Q03013 218 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 EXOSC6Q5RKV6 272 aaKnown RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 PDE12Q6L8Q7 609 aaKnown RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 SEZ6L2Q6UXD5 910 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 LCNL1Q6ZST4 164 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 C1QL4Q86Z23 238 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 PLD6Q8N2A8 252 aaKnown RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 TMEM102Q8N9M5 508 aaPredicted RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 FAM181AQ8N9Y4 354 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 BSNDQ8WZ55 320 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 RC3H2Q9HBD1 1191 aaKnown RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 CXXC1Q9P0U4 656 aaPredicted RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 STIM2Q9P246 746 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 SEPT3Q9UH03 358 aa3.65□□□□□ -1.83
RC3H1-206ENST00000531594 ACIN1Q9UKV3 1341 aaKnown RBP3.65□□□□□ -1.83
RC3H1-206ENST00000531594 EREGO14944 169 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 RFX1P22670 979 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 FLIIQ13045 1269 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 DUSP27Q5VZP5 1158 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 ASAP3Q8TDY4 903 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 EDEM1Q92611 657 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 ACSS3Q9H6R3 686 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 FAM13BQ9NYF5 915 aa3.64□□□□□ -1.83
RC3H1-206ENST00000531594 FUT4P22083 530 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 CFPP27918 469 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 BUD31P41223 144 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-206ENST00000531594 SWI5Q1ZZU3 235 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 AKAP4Q5JQC9 854 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 PEAR1Q5VY43 1037 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-206ENST00000531594 DYMQ7RTS9 669 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 ATG4DQ86TL0 474 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-206ENST00000531594 KSR1Q8IVT5 923 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 PRDM7Q9NQW5 492 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 DAGLAQ9Y4D2 1042 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 NCANO14594 1321 aa3.63□□□□□ -1.83
RC3H1-206ENST00000531594 SLC24A1O60721 1099 aa3.62□□□□□ -1.83
RC3H1-206ENST00000531594 MAOBP27338 520 aa3.62□□□□□ -1.83
RC3H1-206ENST00000531594 DNM1Q05193 864 aaKnown RBP3.62□□□□□ -1.83
RC3H1-206ENST00000531594 CDK5R2Q13319 367 aa3.62□□□□□ -1.83
RC3H1-206ENST00000531594 PKN1Q16512 942 aa3.62□□□□□ -1.83
RC3H1-206ENST00000531594 SOX17Q9H6I2 414 aaPredicted RBP3.62□□□□□ -1.83
RC3H1-206ENST00000531594 CRIM1Q9NZV1 1036 aa3.62□□□□□ -1.83
RC3H1-206ENST00000531594 FOXD3Q9UJU5 478 aaPredicted RBP3.62□□□□□ -1.83
RC3H1-206ENST00000531594 AP4E1Q9UPM8 1137 aa3.62□□□□□ -1.83
RC3H1-206ENST00000531594 ZNF503-AS2A6NEH8 195 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.61□□□□□ -1.83
RC3H1-206ENST00000531594 BIN1O00499 593 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 PRRG2O14669 202 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 PDGFAP04085 211 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 MAP7Q14244 749 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 ZNF423Q2M1K9 1284 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 C8orf34Q49A92 452 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 TMEM164Q5U3C3 297 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 LILRA6Q6PI73 481 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 XKR5Q6UX68 686 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 ABTB2Q8N961 1025 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 TRIM56Q9BRZ2 755 aaKnown RBP3.61□□□□□ -1.83
RC3H1-206ENST00000531594 YIPF2Q9BWQ6 316 aa3.61□□□□□ -1.83
RC3H1-206ENST00000531594 BHLHE41Q9C0J9 482 aaPredicted RBP3.61□□□□□ -1.83
RC3H1-206ENST00000531594 LRRC10BA6NIK2 292 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 POLR3DP05423 398 aaPredicted RBP3.6□□□□□ -1.83
RC3H1-206ENST00000531594 ASPAP45381 313 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 ECM1Q16610 540 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 MLANAQ16655 118 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 SPRED3Q2MJR0 410 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 OGFOD3Q6PK18 319 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 TMEM40Q8WWA1 233 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 GSX1Q9H4S2 264 aaPredicted RBP3.6□□□□□ -1.83
RC3H1-206ENST00000531594 LMCD1Q9NZU5 365 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 PPP1R9AQ9ULJ8 1098 aa3.6□□□□□ -1.83
RC3H1-206ENST00000531594 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.59□□□□□ -1.83
RC3H1-206ENST00000531594 TNFRSF21O75509 655 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 LEFTY1O75610 366 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 KRT1P04264 644 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 FAM87AP0C7U9 286 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 CYP27A1Q02318 531 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 MTMR3Q13615 1198 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 FYB2Q5VWT5 728 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 STK11IPQ8N1F8 1099 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 PI4K2BQ8TCG2 481 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 NETO1Q8TDF5 533 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 WDR89Q96FK6 387 aaPredicted RBP3.59□□□□□ -1.83
RC3H1-206ENST00000531594 LIN37Q96GY3 246 aaPredicted RBP3.59□□□□□ -1.83
RC3H1-206ENST00000531594 FAM84AQ96KN4 292 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 SLC38A3Q99624 504 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 PLAGL2Q9UPG8 496 aa3.59□□□□□ -1.83
RC3H1-206ENST00000531594 B8ZZF3 427 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms