RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
TM9SF1-211ENST00000531406 CAVIN4Q5BKX8 364 aa16.09■□□□□ 0.17
TM9SF1-211ENST00000531406 ANKRD13AQ8IZ07 590 aa16.09■□□□□ 0.17
TM9SF1-211ENST00000531406 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
TM9SF1-211ENST00000531406 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-211ENST00000531406 GJA5P36382 358 aa16.08■□□□□ 0.16
TM9SF1-211ENST00000531406 FBXO46Q6PJ61 603 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-211ENST00000531406 TBC1D22AQ8WUA7 517 aa16.08■□□□□ 0.16
TM9SF1-211ENST00000531406 TEPSINQ96N21 525 aa16.08■□□□□ 0.16
TM9SF1-211ENST00000531406 TCP10L2B9ZVM9 353 aa16.07■□□□□ 0.16
TM9SF1-211ENST00000531406 BCAMP50895 628 aa16.07■□□□□ 0.16
TM9SF1-211ENST00000531406 HDLBPQ00341 1268 aaKnown RBP16.07■□□□□ 0.16
TM9SF1-211ENST00000531406 ALDH1L2Q3SY69 923 aa16.07■□□□□ 0.16
TM9SF1-211ENST00000531406 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
TM9SF1-211ENST00000531406 FGFR2P21802 821 aa16.06■□□□□ 0.16
TM9SF1-211ENST00000531406 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
TM9SF1-211ENST00000531406 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
TM9SF1-211ENST00000531406 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 TESPA1A2RU30 521 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 EYA2O00167 538 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 RFX5P48382 616 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 TNNI2P48788 182 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 PUM3Q15397 648 aaKnown RBP16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 OTUD7BQ6GQQ9 843 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 MIER1Q8N108 512 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 TEKT1Q969V4 418 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
TM9SF1-211ENST00000531406 IFIT1P09914 478 aaKnown RBP16.04■□□□□ 0.16
TM9SF1-211ENST00000531406 MAP3K9P80192 1104 aa16.04■□□□□ 0.16
TM9SF1-211ENST00000531406 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
TM9SF1-211ENST00000531406 OPTNQ96CV9 577 aa16.04■□□□□ 0.16
TM9SF1-211ENST00000531406 ZDHHC15Q96MV8 337 aa16.04■□□□□ 0.16
TM9SF1-211ENST00000531406 PTPN18Q99952 460 aa16.04■□□□□ 0.16
TM9SF1-211ENST00000531406 CACNB3P54284 484 aa16.03■□□□□ 0.16
TM9SF1-211ENST00000531406 CRHR2Q13324 411 aa16.03■□□□□ 0.16
TM9SF1-211ENST00000531406 MS4A4AQ96JQ5 239 aa16.03■□□□□ 0.16
TM9SF1-211ENST00000531406 SUGT1Q9Y2Z0 365 aa16.03■□□□□ 0.16
TM9SF1-211ENST00000531406 TNRC18O15417 2968 aaPredicted RBP16.03■□□□□ 0.16
TM9SF1-211ENST00000531406 SLC34A2O95436 690 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 VGLL4Q14135 290 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 FKBP1CQ5VVH2 108 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 APOBEC3HQ6NTF7 200 aaKnown RBP16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 ATG9AQ7Z3C6 839 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 LPIN2Q92539 896 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 TRIM17Q9Y577 477 aa16.02■□□□□ 0.16
TM9SF1-211ENST00000531406 MAST3O60307 1309 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 SLC5A1P13866 664 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 FAM83AQ86UY5 434 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 BRI3BPQ8WY22 251 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 ERO1AQ96HE7 468 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 CSADQ9Y600 493 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
TM9SF1-211ENST00000531406 CCER2I3L3R5 266 aa16■□□□□ 0.15
TM9SF1-211ENST00000531406 UBTFL1P0CB47 393 aaPredicted RBP16■□□□□ 0.15
TM9SF1-211ENST00000531406 GTF2A2P52657 109 aa16■□□□□ 0.15
TM9SF1-211ENST00000531406 WDR66Q8TBY9 1149 aa16■□□□□ 0.15
TM9SF1-211ENST00000531406 CD99L2Q8TCZ2 262 aa16■□□□□ 0.15
TM9SF1-211ENST00000531406 NOB1Q9ULX3 412 aaKnown RBP16■□□□□ 0.15
TM9SF1-211ENST00000531406 CCL15-CCL14A0A0B4J2E2 113 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 SPDYE5A6NIY4 337 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 CIAO1O76071 339 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 SP3Q02447 781 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 CCL15Q16663 113 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 OTUD5Q96G74 571 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 SIL1Q9H173 461 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
TM9SF1-211ENST00000531406 ATP2B3Q16720 1220 aa15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 HOOK2Q96ED9 719 aa15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 API5Q9BZZ5 524 aaKnown RBP15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 EFCC1Q9HA90 598 aa15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 PTPN22Q9Y2R2 807 aa15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 SNCAIPQ9Y6H5 919 aa15.98■□□□□ 0.15
TM9SF1-211ENST00000531406 ARAP2Q8WZ64 1704 aa15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 TAF1CQ15572 869 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 ERO1BQ86YB8 467 aa15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 ZKSCAN4Q969J2 545 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 WRNIP1Q96S55 665 aa15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 ZFYVE28Q9HCC9 887 aa15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 GNL3LQ9NVN8 582 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 HDAC5Q9UQL6 1122 aa15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 LRRFIP2Q9Y608 721 aaKnown RBP15.97■□□□□ 0.15
TM9SF1-211ENST00000531406 CAP1Q01518 475 aa15.96■□□□□ 0.15
TM9SF1-211ENST00000531406 DIXDC1Q155Q3 683 aa15.96■□□□□ 0.15
TM9SF1-211ENST00000531406 DCAF15Q66K64 600 aa15.96■□□□□ 0.15
TM9SF1-211ENST00000531406 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-211ENST00000531406 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
TM9SF1-211ENST00000531406 DAGLAQ9Y4D2 1042 aa15.96■□□□□ 0.15
TM9SF1-211ENST00000531406 CETPP11597 493 aa15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 PRDX5P30044 214 aa15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms