RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MRPL50Q8N5N7 158 aaKnown RBP23.22■■□□□ 1.31
SSSCA1-206ENST00000531405 ELP3Q9H9T3 547 aa23.22■■□□□ 1.31
SSSCA1-206ENST00000531405 TCP10L2B9ZVM9 353 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 CRKP46108 304 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 CHAF1AQ13111 956 aaPredicted RBP23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 TNFAIP1Q13829 316 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 KLHDC4Q8TBB5 520 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 TEPSINQ96N21 525 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 BRCA2P51587 3418 aa23.21■■□□□ 1.31
SSSCA1-206ENST00000531405 METTL24Q5JXM2 366 aa23.2■■□□□ 1.3
SSSCA1-206ENST00000531405 FBXO33Q7Z6M2 555 aa23.2■■□□□ 1.3
SSSCA1-206ENST00000531405 PTPN18Q99952 460 aa23.2■■□□□ 1.3
SSSCA1-206ENST00000531405 TMEM39BQ9GZU3 492 aa23.2■■□□□ 1.3
SSSCA1-206ENST00000531405 TRIM17Q9Y577 477 aa23.2■■□□□ 1.3
SSSCA1-206ENST00000531405 AK9Q5TCS8 1911 aa23.2■■□□□ 1.3
SSSCA1-206ENST00000531405 RBBP6Q7Z6E9 1792 aaKnown RBP23.19■■□□□ 1.3
SSSCA1-206ENST00000531405 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
SSSCA1-206ENST00000531405 CRHR2Q13324 411 aa23.19■■□□□ 1.3
SSSCA1-206ENST00000531405 OTOP1Q7RTM1 612 aa23.19■■□□□ 1.3
SSSCA1-206ENST00000531405 VGLL2Q8N8G2 317 aa23.19■■□□□ 1.3
SSSCA1-206ENST00000531405 OPTNQ96CV9 577 aa23.19■■□□□ 1.3
SSSCA1-206ENST00000531405 CNKSR2Q8WXI2 1034 aa23.18■■□□□ 1.3
SSSCA1-206ENST00000531405 KIAA0100Q14667 2235 aaKnown RBP23.18■■□□□ 1.3
SSSCA1-206ENST00000531405 FRAT2O75474 233 aaPredicted RBP23.17■■□□□ 1.3
SSSCA1-206ENST00000531405 CACNB3P54284 484 aa23.17■■□□□ 1.3
SSSCA1-206ENST00000531405 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.17■■□□□ 1.3
SSSCA1-206ENST00000531405 CD99L2Q8TCZ2 262 aa23.17■■□□□ 1.3
SSSCA1-206ENST00000531405 PTPRCP08575 1304 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 PDE8BO95263 885 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 BCAMP50895 628 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 CAVIN4Q5BKX8 364 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 OTUD7BQ6GQQ9 843 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 SSH1Q8WYL5 1049 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 ZSWIM8A7E2V4 1837 aa23.16■■□□□ 1.3
SSSCA1-206ENST00000531405 TESPA1A2RU30 521 aaPredicted RBP23.15■■□□□ 1.3
SSSCA1-206ENST00000531405 TNNI2P48788 182 aa23.15■■□□□ 1.3
SSSCA1-206ENST00000531405 VGLL4Q14135 290 aa23.15■■□□□ 1.3
SSSCA1-206ENST00000531405 PRPF38BQ5VTL8 546 aaKnown RBP23.15■■□□□ 1.3
SSSCA1-206ENST00000531405 MS4A4AQ96JQ5 239 aa23.15■■□□□ 1.3
SSSCA1-206ENST00000531405 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
SSSCA1-206ENST00000531405 CAP1Q01518 475 aa23.14■■□□□ 1.29
SSSCA1-206ENST00000531405 TBC1D22AQ8WUA7 517 aa23.14■■□□□ 1.29
SSSCA1-206ENST00000531405 ERO1AQ96HE7 468 aa23.14■■□□□ 1.29
SSSCA1-206ENST00000531405 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.13■■□□□ 1.29
SSSCA1-206ENST00000531405 TEKT1Q969V4 418 aa23.13■■□□□ 1.29
SSSCA1-206ENST00000531405 MAP3K9P80192 1104 aa23.12■■□□□ 1.29
SSSCA1-206ENST00000531405 HDLBPQ00341 1268 aaKnown RBP23.12■■□□□ 1.29
SSSCA1-206ENST00000531405 BRI3BPQ8WY22 251 aa23.12■■□□□ 1.29
SSSCA1-206ENST00000531405 OTUD5Q96G74 571 aa23.12■■□□□ 1.29
SSSCA1-206ENST00000531405 SP3Q02447 781 aa23.11■■□□□ 1.29
SSSCA1-206ENST00000531405 PTPN22Q9Y2R2 807 aa23.11■■□□□ 1.29
SSSCA1-206ENST00000531405 CSADQ9Y600 493 aa23.11■■□□□ 1.29
SSSCA1-206ENST00000531405 CCL15-CCL14A0A0B4J2E2 113 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 POTEFA5A3E0 1075 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 E9PSI1 815 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 FGFR2P21802 821 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 PUM3Q15397 648 aaKnown RBP23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 CCL15Q16663 113 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 ZDHHC15Q96MV8 337 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 EFCC1Q9HA90 598 aa23.1■■□□□ 1.29
SSSCA1-206ENST00000531405 IFIT1P09914 478 aaKnown RBP23.09■■□□□ 1.29
SSSCA1-206ENST00000531405 RFX5P48382 616 aaPredicted RBP23.09■■□□□ 1.29
SSSCA1-206ENST00000531405 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
SSSCA1-206ENST00000531405 MYH2Q9UKX2 1941 aa23.09■■□□□ 1.29
SSSCA1-206ENST00000531405 GTF2A2P52657 109 aa23.08■■□□□ 1.29
SSSCA1-206ENST00000531405 SLFN5Q08AF3 891 aa23.08■■□□□ 1.29
SSSCA1-206ENST00000531405 TAF1CQ15572 869 aaPredicted RBP23.08■■□□□ 1.29
SSSCA1-206ENST00000531405 FAM43AQ8N2R8 423 aa23.08■■□□□ 1.29
SSSCA1-206ENST00000531405 TMOD2Q9NZR1 351 aa23.08■■□□□ 1.29
SSSCA1-206ENST00000531405 KIF16BQ96L93 1317 aa23.08■■□□□ 1.28
SSSCA1-206ENST00000531405 EYA2O00167 538 aa23.07■■□□□ 1.28
SSSCA1-206ENST00000531405 ZKSCAN4Q969J2 545 aaPredicted RBP23.07■■□□□ 1.28
SSSCA1-206ENST00000531405 CDCA7LQ96GN5 454 aa23.07■■□□□ 1.28
SSSCA1-206ENST00000531405 WRNIP1Q96S55 665 aa23.07■■□□□ 1.28
SSSCA1-206ENST00000531405 SNCAIPQ9Y6H5 919 aa23.07■■□□□ 1.28
SSSCA1-206ENST00000531405 MAST3O60307 1309 aa23.07■■□□□ 1.28
SSSCA1-206ENST00000531405 SPDYE5A6NIY4 337 aa23.06■■□□□ 1.28
SSSCA1-206ENST00000531405 SLC5A1P13866 664 aa23.06■■□□□ 1.28
SSSCA1-206ENST00000531405 INTS3Q68E01 1043 aaKnown RBP23.06■■□□□ 1.28
SSSCA1-206ENST00000531405 FAM83AQ86UY5 434 aa23.06■■□□□ 1.28
SSSCA1-206ENST00000531405 MRIQ9BWK5 157 aa23.06■■□□□ 1.28
SSSCA1-206ENST00000531405 ATG9AQ7Z3C6 839 aa23.05■■□□□ 1.28
SSSCA1-206ENST00000531405 SIL1Q9H173 461 aa23.05■■□□□ 1.28
SSSCA1-206ENST00000531405 ZFYVE28Q9HCC9 887 aa23.05■■□□□ 1.28
SSSCA1-206ENST00000531405 SMC4Q9NTJ3 1288 aa23.05■■□□□ 1.28
SSSCA1-206ENST00000531405 SUGT1Q9Y2Z0 365 aa23.05■■□□□ 1.28
SSSCA1-206ENST00000531405 DOCK2Q92608 1830 aa23.05■■□□□ 1.28
SSSCA1-206ENST00000531405 FKBP1CQ5VVH2 108 aa23.04■■□□□ 1.28
SSSCA1-206ENST00000531405 HHIPL2Q6UWX4 724 aa23.04■■□□□ 1.28
SSSCA1-206ENST00000531405 LPIN2Q92539 896 aa23.04■■□□□ 1.28
SSSCA1-206ENST00000531405 ARMC5Q96C12 935 aa23.04■■□□□ 1.28
SSSCA1-206ENST00000531405 RPAP1Q9BWH6 1393 aaPredicted RBP23.03■■□□□ 1.28
SSSCA1-206ENST00000531405 ALDH1L2Q3SY69 923 aa23.03■■□□□ 1.28
SSSCA1-206ENST00000531405 MIGA2Q7L4E1 593 aa23.03■■□□□ 1.28
SSSCA1-206ENST00000531405 ERO1BQ86YB8 467 aa23.03■■□□□ 1.28
SSSCA1-206ENST00000531405 IRF6O14896 467 aa23.02■■□□□ 1.28
SSSCA1-206ENST00000531405 DIXDC1Q155Q3 683 aa23.02■■□□□ 1.28
SSSCA1-206ENST00000531405 WDR66Q8TBY9 1149 aa23.02■■□□□ 1.28
SSSCA1-206ENST00000531405 BTBD19C9JJ37 291 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms