RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 MAST3O60307 1309 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
CAPN1-221ENST00000531068 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
CAPN1-221ENST00000531068 ZBTB22O15209 634 aa13.59□□□□□ -0.23
CAPN1-221ENST00000531068 PPP1R12BO60237 982 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-221ENST00000531068 HSPA8P11142 646 aaKnown RBP13.59□□□□□ -0.23
CAPN1-221ENST00000531068 KIF23Q02241 960 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-221ENST00000531068 ZNF70Q9UC06 446 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-221ENST00000531068 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
CAPN1-221ENST00000531068 PCDHAC2Q9Y5I4 1007 aa13.59□□□□□ -0.23
CAPN1-221ENST00000531068 TNNI2P48788 182 aa13.58□□□□□ -0.24
CAPN1-221ENST00000531068 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
CAPN1-221ENST00000531068 RASA3Q14644 834 aa13.58□□□□□ -0.24
CAPN1-221ENST00000531068 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
CAPN1-221ENST00000531068 ITPRIPQ8IWB1 547 aa13.58□□□□□ -0.24
CAPN1-221ENST00000531068 ZDHHC15Q96MV8 337 aa13.58□□□□□ -0.24
CAPN1-221ENST00000531068 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
CAPN1-221ENST00000531068 COL1A1P02452 1464 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-221ENST00000531068 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-221ENST00000531068 TIMM10P62072 90 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 TFCP2Q12800 502 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 PRKG1Q13976 671 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
CAPN1-221ENST00000531068 LDLRAD1Q5T700 205 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 CCDC102BQ68D86 513 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 HHIPL2Q6UWX4 724 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 ZGPATQ8N5A5 531 aaKnown RBP13.57□□□□□ -0.24
CAPN1-221ENST00000531068 ZIC5Q96T25 663 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 TMOD2Q9NZR1 351 aa13.57□□□□□ -0.24
CAPN1-221ENST00000531068 ANGEL1Q9UNK9 670 aaKnown RBP13.57□□□□□ -0.24
CAPN1-221ENST00000531068 PNMA6EA0A0J9YXQ4 647 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
CAPN1-221ENST00000531068 GRIK5Q16478 980 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 RASAL3Q86YV0 1011 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 CSRNP1Q96S65 589 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 SAGE1Q9NXZ1 904 aa13.56□□□□□ -0.24
CAPN1-221ENST00000531068 PCNTO95613 3336 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 A0A1B0GUL7 405 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 PHKA1P46020 1223 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 IREB2P48200 963 aaKnown RBP13.55□□□□□ -0.24
CAPN1-221ENST00000531068 POLA2Q14181 598 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-221ENST00000531068 FKBP1CQ5VVH2 108 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 SPTY2D1Q68D10 685 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-221ENST00000531068 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
CAPN1-221ENST00000531068 XAGE2Q96GT9 111 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 SALL1Q9NSC2 1324 aa13.55□□□□□ -0.24
CAPN1-221ENST00000531068 TCP10L2B9ZVM9 353 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 RLBP1P12271 317 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 ADORA1P30542 326 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-221ENST00000531068 OS9Q13438 667 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-221ENST00000531068 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 SLF2Q8IX21 1173 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 HOOK2Q96ED9 719 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
CAPN1-221ENST00000531068 RNF186Q9NXI6 227 aa13.54□□□□□ -0.24
CAPN1-221ENST00000531068 USP2O75604 605 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-221ENST00000531068 SURF6O75683 361 aaKnown RBP13.53□□□□□ -0.24
CAPN1-221ENST00000531068 INHBEP58166 350 aa13.53□□□□□ -0.24
CAPN1-221ENST00000531068 SREBF2Q12772 1141 aa13.53□□□□□ -0.24
CAPN1-221ENST00000531068 FAM83AQ86UY5 434 aa13.53□□□□□ -0.24
CAPN1-221ENST00000531068 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
CAPN1-221ENST00000531068 PPP4R2Q9NY27 417 aa13.53□□□□□ -0.24
CAPN1-221ENST00000531068 AOX1Q06278 1338 aa13.53□□□□□ -0.24
CAPN1-221ENST00000531068 PDS5AQ29RF7 1337 aaKnown RBP13.53□□□□□ -0.24
CAPN1-221ENST00000531068 TRPA1O75762 1119 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 PRDX5P30044 214 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 TM4SF4P48230 202 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 ANKRD13AQ8IZ07 590 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 TMEM39BQ9GZU3 492 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 NOP58Q9Y2X3 529 aaKnown RBP13.52□□□□□ -0.25
CAPN1-221ENST00000531068 SPEF2Q9C093 1822 aa13.52□□□□□ -0.25
CAPN1-221ENST00000531068 MANSC4A6NHS7 340 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-221ENST00000531068 UQCRFS1P1P0C7P4 283 aa13.51□□□□□ -0.25
CAPN1-221ENST00000531068 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-221ENST00000531068 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
CAPN1-221ENST00000531068 RASGRF1Q13972 1273 aa13.51□□□□□ -0.25
CAPN1-221ENST00000531068 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-221ENST00000531068 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
CAPN1-221ENST00000531068 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
CAPN1-221ENST00000531068 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
CAPN1-221ENST00000531068 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 CACNB3P54284 484 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 CCDC158Q5M9N0 1113 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
CAPN1-221ENST00000531068 SPATA5Q8NB90 893 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 FAM151AQ8WW52 585 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms