RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
HIF3A-214ENST00000531043 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
HIF3A-214ENST00000531043 ANKRD13AQ8IZ07 590 aa16.84■□□□□ 0.29
HIF3A-214ENST00000531043 PTPN22Q9Y2R2 807 aa16.84■□□□□ 0.29
HIF3A-214ENST00000531043 RIPOR2Q9Y4F9 1068 aa16.84■□□□□ 0.29
HIF3A-214ENST00000531043 CEP290O15078 2479 aa16.84■□□□□ 0.29
HIF3A-214ENST00000531043 UNCXA6NJT0 531 aa16.83■□□□□ 0.28
HIF3A-214ENST00000531043 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
HIF3A-214ENST00000531043 NBPF7P0C2Y1 421 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-214ENST00000531043 CRKP46108 304 aa16.83■□□□□ 0.28
HIF3A-214ENST00000531043 BRI3BPQ8WY22 251 aa16.83■□□□□ 0.28
HIF3A-214ENST00000531043 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
HIF3A-214ENST00000531043 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
HIF3A-214ENST00000531043 ALDH1L1O75891 902 aa16.82■□□□□ 0.28
HIF3A-214ENST00000531043 EN2P19622 333 aaPredicted RBP16.82■□□□□ 0.28
HIF3A-214ENST00000531043 CACNB3P54284 484 aa16.82■□□□□ 0.28
HIF3A-214ENST00000531043 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
HIF3A-214ENST00000531043 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
HIF3A-214ENST00000531043 FBXO33Q7Z6M2 555 aa16.82■□□□□ 0.28
HIF3A-214ENST00000531043 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
HIF3A-214ENST00000531043 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
HIF3A-214ENST00000531043 SP3Q02447 781 aa16.81■□□□□ 0.28
HIF3A-214ENST00000531043 VGLL4Q14135 290 aa16.81■□□□□ 0.28
HIF3A-214ENST00000531043 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
HIF3A-214ENST00000531043 SRCIN1Q9C0H9 1055 aa16.81■□□□□ 0.28
HIF3A-214ENST00000531043 BICC1Q9H694 974 aaKnown RBP16.81■□□□□ 0.28
HIF3A-214ENST00000531043 TNFAIP1Q13829 316 aa16.8■□□□□ 0.28
HIF3A-214ENST00000531043 OTUD7BQ6GQQ9 843 aa16.8■□□□□ 0.28
HIF3A-214ENST00000531043 FAM43AQ8N2R8 423 aa16.8■□□□□ 0.28
HIF3A-214ENST00000531043 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
HIF3A-214ENST00000531043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.8■□□□□ 0.28
HIF3A-214ENST00000531043 UTYO14607 1347 aa16.79■□□□□ 0.28
HIF3A-214ENST00000531043 MAP3K9P80192 1104 aa16.79■□□□□ 0.28
HIF3A-214ENST00000531043 VGLL2Q8N8G2 317 aa16.79■□□□□ 0.28
HIF3A-214ENST00000531043 KLHDC4Q8TBB5 520 aa16.79■□□□□ 0.28
HIF3A-214ENST00000531043 OTUD5Q96G74 571 aa16.79■□□□□ 0.28
HIF3A-214ENST00000531043 CCL15-CCL14A0A0B4J2E2 113 aa16.78■□□□□ 0.28
HIF3A-214ENST00000531043 BCAMP50895 628 aa16.78■□□□□ 0.28
HIF3A-214ENST00000531043 CCL15Q16663 113 aa16.78■□□□□ 0.28
HIF3A-214ENST00000531043 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-214ENST00000531043 INTS3Q68E01 1043 aaKnown RBP16.78■□□□□ 0.28
HIF3A-214ENST00000531043 MROH5Q6ZUA9 1318 aa16.77■□□□□ 0.28
HIF3A-214ENST00000531043 TAF1CQ15572 869 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-214ENST00000531043 METTL24Q5JXM2 366 aa16.77■□□□□ 0.28
HIF3A-214ENST00000531043 ARHGAP39Q9C0H5 1083 aa16.77■□□□□ 0.28
HIF3A-214ENST00000531043 PTCH2Q9Y6C5 1203 aa16.77■□□□□ 0.28
HIF3A-214ENST00000531043 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
HIF3A-214ENST00000531043 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
HIF3A-214ENST00000531043 VPS37DQ86XT2 251 aa16.76■□□□□ 0.27
HIF3A-214ENST00000531043 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-214ENST00000531043 ZNF333Q96JL9 665 aa16.76■□□□□ 0.27
HIF3A-214ENST00000531043 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
HIF3A-214ENST00000531043 SPDYE5A6NIY4 337 aa16.75■□□□□ 0.27
HIF3A-214ENST00000531043 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-214ENST00000531043 MYCP01106 439 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-214ENST00000531043 GTF2A2P52657 109 aa16.75■□□□□ 0.27
HIF3A-214ENST00000531043 HABP4Q5JVS0 413 aaKnown RBP16.75■□□□□ 0.27
HIF3A-214ENST00000531043 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
HIF3A-214ENST00000531043 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
HIF3A-214ENST00000531043 ZFYVE28Q9HCC9 887 aa16.75■□□□□ 0.27
HIF3A-214ENST00000531043 CSADQ9Y600 493 aa16.75■□□□□ 0.27
HIF3A-214ENST00000531043 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 BTBD19C9JJ37 291 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 ANP32CO43423 234 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 PDE8BO95263 885 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 TNNI2P48788 182 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
HIF3A-214ENST00000531043 TEKT1Q969V4 418 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
HIF3A-214ENST00000531043 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
HIF3A-214ENST00000531043 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
HIF3A-214ENST00000531043 IRF6O14896 467 aa16.73■□□□□ 0.27
HIF3A-214ENST00000531043 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-214ENST00000531043 FGFR2P21802 821 aa16.73■□□□□ 0.27
HIF3A-214ENST00000531043 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
HIF3A-214ENST00000531043 INPP5BP32019 993 aa16.72■□□□□ 0.27
HIF3A-214ENST00000531043 CAVIN4Q5BKX8 364 aa16.72■□□□□ 0.27
HIF3A-214ENST00000531043 MIGA2Q7L4E1 593 aa16.72■□□□□ 0.27
HIF3A-214ENST00000531043 SH3TC2Q8TF17 1288 aa16.72■□□□□ 0.27
HIF3A-214ENST00000531043 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
HIF3A-214ENST00000531043 CTGFP29279 349 aa16.71■□□□□ 0.27
HIF3A-214ENST00000531043 RFX5P48382 616 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-214ENST00000531043 SLC9C1Q4G0N8 1177 aa16.71■□□□□ 0.27
HIF3A-214ENST00000531043 FAM83AQ86UY5 434 aa16.71■□□□□ 0.27
HIF3A-214ENST00000531043 ERO1BQ86YB8 467 aa16.71■□□□□ 0.27
HIF3A-214ENST00000531043 TLR2O60603 784 aa16.7■□□□□ 0.26
HIF3A-214ENST00000531043 CETPP11597 493 aa16.7■□□□□ 0.26
HIF3A-214ENST00000531043 SSH1Q8WYL5 1049 aa16.7■□□□□ 0.26
HIF3A-214ENST00000531043 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
HIF3A-214ENST00000531043 TMEM106CQ9BVX2 250 aa16.7■□□□□ 0.26
HIF3A-214ENST00000531043 MRIQ9BWK5 157 aa16.7■□□□□ 0.26
HIF3A-214ENST00000531043 LACTBP83111 547 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-214ENST00000531043 PPIL2Q13356 520 aa16.69■□□□□ 0.26
HIF3A-214ENST00000531043 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
HIF3A-214ENST00000531043 PUM3Q15397 648 aaKnown RBP16.69■□□□□ 0.26
HIF3A-214ENST00000531043 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
HIF3A-214ENST00000531043 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
HIF3A-214ENST00000531043 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
HIF3A-214ENST00000531043 TCP10Q12799 353 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms