RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
RPUSD4-205ENST00000530903 MCAMP43121 646 aa12.15□□□□□ -0.46
RPUSD4-205ENST00000530903 PI16Q6UXB8 463 aa12.15□□□□□ -0.46
RPUSD4-205ENST00000530903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPUSD4-205ENST00000530903 HAUS7Q99871 368 aa12.15□□□□□ -0.46
RPUSD4-205ENST00000530903 SNED1Q8TER0 1413 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 GOLIM4O00461 696 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 ZAP70P43403 619 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 FKBP4Q02790 459 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 RASGRF1Q13972 1273 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 ZNF512BQ96KM6 892 aaPredicted RBP12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 GNL3LQ9NVN8 582 aaKnown RBP12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 MED23Q9ULK4 1368 aa12.14□□□□□ -0.47
RPUSD4-205ENST00000530903 COL1A1P02452 1464 aaPredicted RBP12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 C8orf34Q49A92 452 aa12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 C15orf52Q6ZUT6 534 aaKnown RBP12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 ZNF804AQ7Z570 1209 aa12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 HMG20BQ9P0W2 317 aa12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 FER1L6Q2WGJ9 1857 aa12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 MYH7P12883 1935 aa12.13□□□□□ -0.47
RPUSD4-205ENST00000530903 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 WASHC4Q2M389 1173 aa12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 RTKN2Q8IZC4 609 aa12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 EYA3Q99504 573 aa12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 RTFDC1Q9BY42 306 aaPredicted RBP12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
RPUSD4-205ENST00000530903 KIF3CO14782 793 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 CDC45O75419 566 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 TBC1D9Q6ZT07 1266 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 DOCK2Q92608 1830 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 CHD4Q14839 1912 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 CYP2E1P05181 493 aaPredicted RBP12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 AOC3Q16853 763 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
RPUSD4-205ENST00000530903 SEMA3EO15041 775 aa12.1□□□□□ -0.47
RPUSD4-205ENST00000530903 KBTBD3Q8NAB2 608 aa12.1□□□□□ -0.47
RPUSD4-205ENST00000530903 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
RPUSD4-205ENST00000530903 PSMD1Q99460 953 aa12.1□□□□□ -0.47
RPUSD4-205ENST00000530903 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
RPUSD4-205ENST00000530903 ZNF277Q9NRM2 450 aaPredicted RBP12.1□□□□□ -0.47
RPUSD4-205ENST00000530903 PPIP5K2O43314 1243 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 CHGBP05060 677 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 IL1R1P14778 569 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 CHMLP26374 656 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 CASC1Q6TDU7 716 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
RPUSD4-205ENST00000530903 ECE2O60344 883 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 IDH1O75874 414 aaKnown RBP12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 MFRPQ9BY79 579 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 CCDC88AQ3V6T2 1871 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 COL4A5P29400 1685 aa12.08□□□□□ -0.48
RPUSD4-205ENST00000530903 RFX7Q2KHR2 1363 aa12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 NFKBIEO00221 500 aa12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 RASSF7Q02833 373 aa12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 CWC27Q6UX04 472 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
RPUSD4-205ENST00000530903 ZNF646O15015 1829 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 MAST2Q6P0Q8 1798 aa12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 GOLGB1Q14789 3259 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 HIP1O00291 1037 aa12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 IARSP41252 1262 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 GTF2IP78347 998 aa12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 LARGE2Q8N3Y3 721 aa12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
RPUSD4-205ENST00000530903 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms