RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 LRRC3Q9BY71 257 aa2.9□□□□□ -1.95
FGFR1-235ENST00000530701 BHLHE41Q9C0J9 482 aaPredicted RBP2.9□□□□□ -1.95
FGFR1-235ENST00000530701 CLEC4MQ9H2X3 399 aaPredicted RBP2.9□□□□□ -1.95
FGFR1-235ENST00000530701 ZNF576Q9H609 170 aa2.9□□□□□ -1.95
FGFR1-235ENST00000530701 ZFATQ9P243 1243 aa2.9□□□□□ -1.95
FGFR1-235ENST00000530701 SOS2Q07890 1332 aaPredicted RBP2.9□□□□□ -1.95
FGFR1-235ENST00000530701 LOC102724428A0A0B4J2F2 783 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 A0A0G2JS52 829 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 FAM221BA6H8Z2 402 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 FAM187AA6NFU0 413 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 METTL12A8MUP2 240 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 S100BP04271 92 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 HOXD8P13378 290 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 BMP1P13497 986 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 PTPRAP18433 802 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 GARTP22102 1010 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 GIPRP48546 466 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 SIK1P57059 783 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 GPLD1P80108 840 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 MLLT1Q03111 559 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 TNP2Q05952 138 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 PCDH1Q08174 1060 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 RASGRF1Q13972 1273 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 SEPT6Q14141 434 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 TCEA2Q15560 299 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 LRRFIP1Q32MZ4 808 aaKnown RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 HSP90AB2PQ58FF8 381 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 CCDC181Q5TID7 509 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 BNC2Q6ZN30 1099 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 HFE2Q6ZVN8 426 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 C16orf86Q6ZW13 317 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 RAB44Q7Z6P3 723 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 SULF2Q8IWU5 870 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 NXPE3Q969Y0 559 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 GMCL1Q96IK5 515 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 CNTNAP3BQ96NU0 1288 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 CEP89Q96ST8 783 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 FEZ1Q99689 392 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 PBX4Q9BYU1 374 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 CNTNAP3Q9BZ76 1288 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 UBE2OQ9C0C9 1292 aaKnown RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 RASSF4Q9H2L5 321 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 BRMS1Q9HCU9 246 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 PCDH12Q9NPG4 1184 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 PLA2G2EQ9NZK7 142 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 ATXN7L1Q9ULK2 861 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 ZNRF3Q9ULT6 936 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 SLC12A7Q9Y666 1083 aa2.89□□□□□ -1.95
FGFR1-235ENST00000530701 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.89□□□□□ -1.95
FGFR1-235ENST00000530701 ESYT3A0FGR9 886 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 J3QW42 95 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 AGRPO00253 132 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 CILPO75339 1184 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 PAGE1O75459 146 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 ACPPP15309 386 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 CD33P20138 364 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 FGFR3P22607 806 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 CNGA1P29973 690 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 RPL6Q02878 288 aaKnown RBP2.88□□□□□ -1.95
FGFR1-235ENST00000530701 SSRP1Q08945 709 aaKnown RBP2.88□□□□□ -1.95
FGFR1-235ENST00000530701 AP3B2Q13367 1082 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 C2orf27AQ580R0 203 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 CT47A1Q5JQC4 288 aaPredicted RBP2.88□□□□□ -1.95
FGFR1-235ENST00000530701 COL13A1Q5TAT6 717 aaPredicted RBP2.88□□□□□ -1.95
FGFR1-235ENST00000530701 SCARA3Q6AZY7 606 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 EEPD1Q7L9B9 569 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 FAM35AQ86V20 835 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 SYNPOQ8N3V7 929 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 CELF2-AS1Q8N7Q2 184 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 FAM169BQ8N8A8 192 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 FBXO27Q8NI29 283 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 THAP3Q8WTV1 239 aaPredicted RBP2.88□□□□□ -1.95
FGFR1-235ENST00000530701 ABHD17AQ96GS6 310 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 ZFP42Q96MM3 310 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 IPO9Q96P70 1041 aaKnown RBP2.88□□□□□ -1.95
FGFR1-235ENST00000530701 MUC3BQ9H195 1237 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 PFDN2Q9UHV9 154 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 DNMT3LQ9UJW3 386 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 PDZRN3Q9UPQ7 1066 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 PCDHB5Q9Y5E4 795 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 PCDHB14Q9Y5E9 798 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 KDM2BQ8NHM5 1336 aa2.88□□□□□ -1.95
FGFR1-235ENST00000530701 FAM221AA4D161 298 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 IQCA1LA6NCM1 817 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 AXIN1O15169 862 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 BNIP3LO60238 219 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 GRIN3BO60391 1043 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 GJB6O95452 261 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 B3GALT4O96024 378 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 CPB1P15086 417 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 ARNTP27540 789 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 ARL4DP49703 201 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 GYS2P54840 703 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 CASP7P55210 303 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 ATP11AP98196 1134 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 CLCQ05315 142 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 FAAP100Q0VG06 881 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 IKBKEQ14164 716 aa2.87□□□□□ -1.95
FGFR1-235ENST00000530701 MAP1SQ66K74 1059 aaPredicted RBP2.87□□□□□ -1.95
FGFR1-235ENST00000530701 FAM117BQ6P1L5 589 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms