RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 BRCA2P51587 3418 aa28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 CRKP46108 304 aa28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 DZIP1LQ8IYY4 767 aaKnown RBP28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 ANKRD13AQ8IZ07 590 aa28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 VGLL2Q8N8G2 317 aa28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 TEPSINQ96N21 525 aa28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 PTPRCP08575 1304 aa28.15■■■□□ 2.1
PACSIN3-207ENST00000530513 CHAF1AQ13111 956 aaPredicted RBP28.14■■■□□ 2.1
PACSIN3-207ENST00000530513 METTL24Q5JXM2 366 aa28.14■■■□□ 2.1
PACSIN3-207ENST00000530513 FBXO33Q7Z6M2 555 aa28.14■■■□□ 2.1
PACSIN3-207ENST00000530513 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
PACSIN3-207ENST00000530513 TCP10L2B9ZVM9 353 aa28.13■■■□□ 2.09
PACSIN3-207ENST00000530513 VPS37DQ86XT2 251 aa28.13■■■□□ 2.09
PACSIN3-207ENST00000530513 MKI67P46013 3256 aaKnown RBP28.13■■■□□ 2.09
PACSIN3-207ENST00000530513 RBBP6Q7Z6E9 1792 aaKnown RBP28.12■■■□□ 2.09
PACSIN3-207ENST00000530513 TMEM39BQ9GZU3 492 aa28.12■■■□□ 2.09
PACSIN3-207ENST00000530513 ELP3Q9H9T3 547 aa28.12■■■□□ 2.09
PACSIN3-207ENST00000530513 PDE8BO95263 885 aa28.11■■■□□ 2.09
PACSIN3-207ENST00000530513 SSH1Q8WYL5 1049 aa28.11■■■□□ 2.09
PACSIN3-207ENST00000530513 CRHR2Q13324 411 aa28.1■■■□□ 2.09
PACSIN3-207ENST00000530513 OPTNQ96CV9 577 aa28.1■■■□□ 2.09
PACSIN3-207ENST00000530513 PTPN18Q99952 460 aa28.1■■■□□ 2.09
PACSIN3-207ENST00000530513 TRIM17Q9Y577 477 aa28.1■■■□□ 2.09
PACSIN3-207ENST00000530513 CAVIN4Q5BKX8 364 aa28.09■■■□□ 2.09
PACSIN3-207ENST00000530513 OTOP1Q7RTM1 612 aa28.09■■■□□ 2.09
PACSIN3-207ENST00000530513 CNKSR2Q8WXI2 1034 aa28.09■■■□□ 2.09
PACSIN3-207ENST00000530513 USP44Q9H0E7 712 aa28.09■■■□□ 2.09
PACSIN3-207ENST00000530513 E9PSI1 815 aa28.08■■■□□ 2.09
PACSIN3-207ENST00000530513 CACNB3P54284 484 aa28.08■■■□□ 2.09
PACSIN3-207ENST00000530513 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.08■■■□□ 2.09
PACSIN3-207ENST00000530513 TBC1D22AQ8WUA7 517 aa28.08■■■□□ 2.09
PACSIN3-207ENST00000530513 TESPA1A2RU30 521 aaPredicted RBP28.07■■■□□ 2.08
PACSIN3-207ENST00000530513 FRAT2O75474 233 aaPredicted RBP28.07■■■□□ 2.08
PACSIN3-207ENST00000530513 BCAMP50895 628 aa28.07■■■□□ 2.08
PACSIN3-207ENST00000530513 VGLL4Q14135 290 aa28.07■■■□□ 2.08
PACSIN3-207ENST00000530513 TNNI2P48788 182 aa28.06■■■□□ 2.08
PACSIN3-207ENST00000530513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.06■■■□□ 2.08
PACSIN3-207ENST00000530513 CD99L2Q8TCZ2 262 aa28.06■■■□□ 2.08
PACSIN3-207ENST00000530513 TEKT1Q969V4 418 aa28.06■■■□□ 2.08
PACSIN3-207ENST00000530513 ZSWIM8A7E2V4 1837 aa28.05■■■□□ 2.08
PACSIN3-207ENST00000530513 FGFR2P21802 821 aa28.05■■■□□ 2.08
PACSIN3-207ENST00000530513 HDLBPQ00341 1268 aaKnown RBP28.05■■■□□ 2.08
PACSIN3-207ENST00000530513 PUM3Q15397 648 aaKnown RBP28.05■■■□□ 2.08
PACSIN3-207ENST00000530513 OTUD7BQ6GQQ9 843 aa28.05■■■□□ 2.08
PACSIN3-207ENST00000530513 MS4A4AQ96JQ5 239 aa28.05■■■□□ 2.08
PACSIN3-207ENST00000530513 KIF16BQ96L93 1317 aa28.04■■■□□ 2.08
PACSIN3-207ENST00000530513 ERO1AQ96HE7 468 aa28.04■■■□□ 2.08
PACSIN3-207ENST00000530513 RFX5P48382 616 aaPredicted RBP28.03■■■□□ 2.08
PACSIN3-207ENST00000530513 CAP1Q01518 475 aa28.03■■■□□ 2.08
PACSIN3-207ENST00000530513 SLFN5Q08AF3 891 aa28.03■■■□□ 2.08
PACSIN3-207ENST00000530513 PRPF38BQ5VTL8 546 aaKnown RBP28.03■■■□□ 2.08
PACSIN3-207ENST00000530513 BRI3BPQ8WY22 251 aa28.03■■■□□ 2.08
PACSIN3-207ENST00000530513 ZDHHC15Q96MV8 337 aa28.03■■■□□ 2.08
PACSIN3-207ENST00000530513 IFIT1P09914 478 aaKnown RBP28.01■■■□□ 2.07
PACSIN3-207ENST00000530513 MAP3K9P80192 1104 aa28.01■■■□□ 2.07
PACSIN3-207ENST00000530513 OTUD5Q96G74 571 aa28.01■■■□□ 2.07
PACSIN3-207ENST00000530513 CSADQ9Y600 493 aa28.01■■■□□ 2.07
PACSIN3-207ENST00000530513 MAST3O60307 1309 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 CCL15-CCL14A0A0B4J2E2 113 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 EYA2O00167 538 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 CCL15Q16663 113 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 APOBEC3HQ6NTF7 200 aaKnown RBP28■■■□□ 2.07
PACSIN3-207ENST00000530513 CDCA7LQ96GN5 454 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 SMC4Q9NTJ3 1288 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 PTPN22Q9Y2R2 807 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 SNCAIPQ9Y6H5 919 aa28■■■□□ 2.07
PACSIN3-207ENST00000530513 SP3Q02447 781 aa27.99■■■□□ 2.07
PACSIN3-207ENST00000530513 ALDH1L2Q3SY69 923 aa27.99■■■□□ 2.07
PACSIN3-207ENST00000530513 TMOD2Q9NZR1 351 aa27.99■■■□□ 2.07
PACSIN3-207ENST00000530513 RPAP1Q9BWH6 1393 aaPredicted RBP27.99■■■□□ 2.07
PACSIN3-207ENST00000530513 AK9Q5TCS8 1911 aa27.98■■■□□ 2.07
PACSIN3-207ENST00000530513 ATG9AQ7Z3C6 839 aa27.98■■■□□ 2.07
PACSIN3-207ENST00000530513 SUGT1Q9Y2Z0 365 aa27.98■■■□□ 2.07
PACSIN3-207ENST00000530513 POTEFA5A3E0 1075 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 SPDYE5A6NIY4 337 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 SLC5A1P13866 664 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 GTF2A2P52657 109 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 FAM83AQ86UY5 434 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 FAM43AQ8N2R8 423 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 WRNIP1Q96S55 665 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 MRIQ9BWK5 157 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 EFCC1Q9HA90 598 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 DOCK2Q92608 1830 aa27.97■■■□□ 2.07
PACSIN3-207ENST00000530513 TAF1CQ15572 869 aaPredicted RBP27.96■■■□□ 2.07
PACSIN3-207ENST00000530513 FKBP1CQ5VVH2 108 aa27.96■■■□□ 2.07
PACSIN3-207ENST00000530513 HHIPL2Q6UWX4 724 aa27.96■■■□□ 2.07
PACSIN3-207ENST00000530513 LPIN2Q92539 896 aa27.96■■■□□ 2.07
PACSIN3-207ENST00000530513 ZKSCAN4Q969J2 545 aaPredicted RBP27.95■■■□□ 2.06
PACSIN3-207ENST00000530513 SIL1Q9H173 461 aa27.95■■■□□ 2.06
PACSIN3-207ENST00000530513 KIAA0100Q14667 2235 aaKnown RBP27.94■■■□□ 2.06
PACSIN3-207ENST00000530513 MYH2Q9UKX2 1941 aa27.94■■■□□ 2.06
PACSIN3-207ENST00000530513 INTS3Q68E01 1043 aaKnown RBP27.93■■■□□ 2.06
PACSIN3-207ENST00000530513 WDR66Q8TBY9 1149 aa27.93■■■□□ 2.06
PACSIN3-207ENST00000530513 ARMC5Q96C12 935 aa27.93■■■□□ 2.06
PACSIN3-207ENST00000530513 ZFYVE28Q9HCC9 887 aa27.93■■■□□ 2.06
PACSIN3-207ENST00000530513 UBTFL1P0CB47 393 aaPredicted RBP27.92■■■□□ 2.06
PACSIN3-207ENST00000530513 DIXDC1Q155Q3 683 aa27.92■■■□□ 2.06
PACSIN3-207ENST00000530513 ERO1BQ86YB8 467 aa27.92■■■□□ 2.06
PACSIN3-207ENST00000530513 DAGLAQ9Y4D2 1042 aa27.92■■■□□ 2.06
PACSIN3-207ENST00000530513 PRDX5P30044 214 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms