RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
SOX6-213ENST00000530378 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 JDP2Q8WYK2 163 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.35
SOX6-213ENST00000530378 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
SOX6-213ENST00000530378 MECOMQ03112 1051 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
SOX6-213ENST00000530378 ESYT1Q9BSJ8 1104 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 PDS5AQ29RF7 1337 aaKnown RBP12.85□□□□□ -0.35
SOX6-213ENST00000530378 FAM205AQ6ZU69 1335 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 PSMD14O00487 310 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 CYP7A1P22680 504 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 ADD2P35612 726 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 SCNN1DP51172 638 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 MAST3O60307 1309 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
SOX6-213ENST00000530378 LMNB1P20700 586 aa12.84□□□□□ -0.35
SOX6-213ENST00000530378 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
SOX6-213ENST00000530378 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
SOX6-213ENST00000530378 OSBP2Q969R2 916 aa12.84□□□□□ -0.35
SOX6-213ENST00000530378 NSUN4Q96CB9 384 aaKnown RBP12.84□□□□□ -0.35
SOX6-213ENST00000530378 PUS7LQ9H0K6 701 aaKnown RBP12.84□□□□□ -0.35
SOX6-213ENST00000530378 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
SOX6-213ENST00000530378 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
SOX6-213ENST00000530378 ZNF541Q9H0D2 1346 aa12.84□□□□□ -0.35
SOX6-213ENST00000530378 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
SOX6-213ENST00000530378 TCRBV5S4A2TA0A5A2 114 aa12.83□□□□□ -0.35
SOX6-213ENST00000530378 CXCL9Q07325 125 aa12.83□□□□□ -0.35
SOX6-213ENST00000530378 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.35
SOX6-213ENST00000530378 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.35
SOX6-213ENST00000530378 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.35
SOX6-213ENST00000530378 TTF2Q9UNY4 1162 aaKnown RBP12.83□□□□□ -0.35
SOX6-213ENST00000530378 GJA3Q9Y6H8 435 aa12.83□□□□□ -0.35
SOX6-213ENST00000530378 HIP1O00291 1037 aa12.83□□□□□ -0.36
SOX6-213ENST00000530378 MBD4O95243 580 aa12.83□□□□□ -0.36
SOX6-213ENST00000530378 STRIP1Q5VSL9 837 aa12.83□□□□□ -0.36
SOX6-213ENST00000530378 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
SOX6-213ENST00000530378 ZSCAN25Q6NSZ9 544 aa12.83□□□□□ -0.36
SOX6-213ENST00000530378 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
SOX6-213ENST00000530378 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
SOX6-213ENST00000530378 SGSM2O43147 1006 aa12.82□□□□□ -0.36
SOX6-213ENST00000530378 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
SOX6-213ENST00000530378 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
SOX6-213ENST00000530378 APPBP2Q92624 585 aa12.82□□□□□ -0.36
SOX6-213ENST00000530378 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
SOX6-213ENST00000530378 AATFQ9NY61 560 aaKnown RBP eCLIP12.82□□□□□ -0.36
SOX6-213ENST00000530378 PCDHAC2Q9Y5I4 1007 aa12.82□□□□□ -0.36
SOX6-213ENST00000530378 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
SOX6-213ENST00000530378 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
SOX6-213ENST00000530378 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
SOX6-213ENST00000530378 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 CIAPIN1Q6FI81 312 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 RUFY2Q8WXA3 655 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 CCDC171Q6TFL3 1326 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 GPAA1O43292 621 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
SOX6-213ENST00000530378 PTH1RQ03431 593 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 RSBN1LQ6PCB5 846 aaPredicted RBP12.81□□□□□ -0.36
SOX6-213ENST00000530378 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
SOX6-213ENST00000530378 MROH7-TTC4A0A0A0MT08 1334 aa12.8□□□□□ -0.36
SOX6-213ENST00000530378 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
SOX6-213ENST00000530378 HELLSQ9NRZ9 838 aa12.8□□□□□ -0.36
SOX6-213ENST00000530378 RAD50Q92878 1312 aa12.79□□□□□ -0.36
SOX6-213ENST00000530378 ECM29Q5VYK3 1845 aa12.79□□□□□ -0.36
SOX6-213ENST00000530378 MAGEB6P1A0A0J9YX57 407 aa12.79□□□□□ -0.36
SOX6-213ENST00000530378 PRKAB2O43741 272 aa12.79□□□□□ -0.36
SOX6-213ENST00000530378 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
SOX6-213ENST00000530378 NAV1Q8NEY1 1877 aa12.79□□□□□ -0.36
SOX6-213ENST00000530378 FZD9O00144 591 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 VIL1P09327 827 aaKnown RBP12.78□□□□□ -0.36
SOX6-213ENST00000530378 BTDP43251 543 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 GMPSP49915 693 aaPredicted RBP12.78□□□□□ -0.36
SOX6-213ENST00000530378 KIAA1211Q6ZU35 1233 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 LSG1Q9H089 658 aaKnown RBP12.78□□□□□ -0.36
SOX6-213ENST00000530378 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 REC8O95072 547 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 CRKP46108 304 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 GSTO1P78417 241 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 SLC4A8Q2Y0W8 1093 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 SH3RF3Q8TEJ3 882 aaPredicted RBP12.78□□□□□ -0.36
SOX6-213ENST00000530378 SDR42E1Q8WUS8 393 aa12.78□□□□□ -0.36
SOX6-213ENST00000530378 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
SOX6-213ENST00000530378 APPP05067 770 aa12.77□□□□□ -0.37
SOX6-213ENST00000530378 TNIP1Q15025 636 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms