RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
SCN3B-206ENST00000530277 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.13
SCN3B-206ENST00000530277 M0R2C6 588 aa14.21□□□□□ -0.14
SCN3B-206ENST00000530277 ZNF202O95125 648 aa14.21□□□□□ -0.14
SCN3B-206ENST00000530277 TCIRG1Q13488 830 aa14.21□□□□□ -0.14
SCN3B-206ENST00000530277 HS1BP3Q53T59 392 aa14.21□□□□□ -0.14
SCN3B-206ENST00000530277 NUP88Q99567 741 aaPredicted RBP14.21□□□□□ -0.14
SCN3B-206ENST00000530277 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.14
SCN3B-206ENST00000530277 ANGEL1Q9UNK9 670 aaKnown RBP14.21□□□□□ -0.14
SCN3B-206ENST00000530277 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.14
SCN3B-206ENST00000530277 CCDC194A0A1B0GVG4 234 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 ANO1Q5XXA6 986 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 KRT40Q6A162 431 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 MROH2AA6NES4 1674 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 MED14O60244 1454 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 MAST3O60307 1309 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 MCM7P33993 719 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 EPS15P42566 896 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 CDC5LQ99459 802 aaKnown RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 DEF6Q9H4E7 631 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 PDIA3P30101 505 aaKnown RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 GYG1P46976 350 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 SEC31BQ9NQW1 1179 aa14.2□□□□□ -0.14
SCN3B-206ENST00000530277 V9GY48 417 aaPredicted RBP14.2□□□□□ -0.14
SCN3B-206ENST00000530277 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 PNOCQ13519 176 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 C11orf57Q6ZUT1 292 aaPredicted RBP14.19□□□□□ -0.14
SCN3B-206ENST00000530277 PRIMPOLQ96LW4 560 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 RNF41Q9H4P4 317 aaPredicted RBP14.19□□□□□ -0.14
SCN3B-206ENST00000530277 MCM9Q9NXL9 1143 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 ARAP3Q8WWN8 1544 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 NDUFA8P51970 172 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 LAMC1P11047 1609 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 N4BP3O15049 544 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 HSP90B2PQ58FF3 399 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
SCN3B-206ENST00000530277 DACH1Q9UI36 760 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 PCDHA7Q9UN72 937 aa14.19□□□□□ -0.14
SCN3B-206ENST00000530277 PRKAB2O43741 272 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 CCT6AP40227 531 aaKnown RBP14.18□□□□□ -0.14
SCN3B-206ENST00000530277 TOB2Q14106 344 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-206ENST00000530277 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-206ENST00000530277 ESR2Q92731 530 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 VPS54Q9P1Q0 977 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 PICALMQ13492 652 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 LONRF3Q496Y0 759 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 DHX37Q8IY37 1157 aaKnown RBP14.18□□□□□ -0.14
SCN3B-206ENST00000530277 CD163L1Q9NR16 1453 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 MAGEB6P1A0A0J9YX57 407 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 BTBD18B2RXH4 712 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 FAM47AQ5JRC9 791 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 HEATR3Q7Z4Q2 680 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 DRC1Q96MC2 740 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 XPO4Q9C0E2 1151 aaKnown RBP14.18□□□□□ -0.14
SCN3B-206ENST00000530277 SH3TC1Q8TE82 1336 aa14.18□□□□□ -0.14
SCN3B-206ENST00000530277 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 EIF6P56537 245 aaKnown RBP14.17□□□□□ -0.14
SCN3B-206ENST00000530277 GPS2Q13227 327 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 HLFQ16534 295 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 NSUN7Q8NE18 718 aaKnown RBP14.17□□□□□ -0.14
SCN3B-206ENST00000530277 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
SCN3B-206ENST00000530277 SAP30BPQ9UHR5 308 aaKnown RBP14.17□□□□□ -0.14
SCN3B-206ENST00000530277 UBA7P41226 1012 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 MYSM1Q5VVJ2 828 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 RRAGBQ5VZM2 374 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 TTC14Q96N46 770 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 CEP131Q9UPN4 1083 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 TMCO3Q6UWJ1 677 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 CCDC102AQ96A19 550 aa14.17□□□□□ -0.14
SCN3B-206ENST00000530277 CYP2E1P05181 493 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-206ENST00000530277 MATR3P43243 847 aaKnown RBP eCLIP14.16□□□□□ -0.14
SCN3B-206ENST00000530277 COL9A3Q14050 684 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-206ENST00000530277 SCARF1Q14162 830 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 KIAA1328Q86T90 577 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 AXDND1Q5T1B0 1012 aaPredicted RBP14.16□□□□□ -0.14
SCN3B-206ENST00000530277 UBA5Q9GZZ9 404 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 KAT14Q9H8E8 782 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 PDE6AP16499 860 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 GSDMDP57764 484 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 PPARDQ03181 441 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 DPCR1Q3MIW9 517 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 KCNH3Q9ULD8 1083 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
SCN3B-206ENST00000530277 CYP2D7A0A087X1C5 515 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 TRIM75PA6NK02 468 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 CASQ1P31415 396 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 NAA30Q147X3 362 aaPredicted RBP14.15□□□□□ -0.14
SCN3B-206ENST00000530277 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 BCL2L12Q9HB09 334 aa14.15□□□□□ -0.14
SCN3B-206ENST00000530277 ZNHIT6Q9NWK9 470 aaKnown RBP14.15□□□□□ -0.14
SCN3B-206ENST00000530277 STIM1Q13586 685 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms