RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SH3TC2Q8TF17 1288 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 ARHGAP39Q9C0H5 1083 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 TMEM39BQ9GZU3 492 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 ZFYVE28Q9HCC9 887 aa14.41□□□□□ -0.1
SF3B2-208ENST00000529994 TTF2Q9UNY4 1162 aaKnown RBP14.41□□□□□ -0.1
SF3B2-208ENST00000529994 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
SF3B2-208ENST00000529994 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
SF3B2-208ENST00000529994 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
SF3B2-208ENST00000529994 ARAP2Q8WZ64 1704 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 GYG1P46976 350 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 GTF2A2P52657 109 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 TAF7LQ5H9L4 462 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 EPHA10Q5JZY3 1008 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 LMBR1LQ6UX01 489 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
SF3B2-208ENST00000529994 CNNM1Q9NRU3 951 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 CSADQ9Y600 493 aa14.39□□□□□ -0.11
SF3B2-208ENST00000529994 CACNA1FO60840 1977 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 F6X3S4 739 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 CACNB3P54284 484 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 GRIK5Q16478 980 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 CCDC57Q2TAC2 916 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 FAM9BQ8IZU0 186 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.38□□□□□ -0.11
SF3B2-208ENST00000529994 SERPINA10Q9UK55 444 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 FAM205AQ6ZU69 1335 aa14.38□□□□□ -0.11
SF3B2-208ENST00000529994 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
SF3B2-208ENST00000529994 TDRD7Q8NHU6 1098 aaKnown RBP14.37□□□□□ -0.11
SF3B2-208ENST00000529994 IQSEC3Q9UPP2 1182 aaPredicted RBP14.37□□□□□ -0.11
SF3B2-208ENST00000529994 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
SF3B2-208ENST00000529994 HIBADHP31937 336 aaKnown RBP14.36□□□□□ -0.11
SF3B2-208ENST00000529994 CRKP46108 304 aa14.36□□□□□ -0.11
SF3B2-208ENST00000529994 TNNI2P48788 182 aa14.36□□□□□ -0.11
SF3B2-208ENST00000529994 KIF22Q14807 665 aa14.36□□□□□ -0.11
SF3B2-208ENST00000529994 WWC1Q8IX03 1113 aa14.36□□□□□ -0.11
SF3B2-208ENST00000529994 SPDYE5A6NIY4 337 aa14.35□□□□□ -0.11
SF3B2-208ENST00000529994 TLR2O60603 784 aa14.35□□□□□ -0.11
SF3B2-208ENST00000529994 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-208ENST00000529994 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-208ENST00000529994 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-208ENST00000529994 MTFR1Q15390 333 aa14.35□□□□□ -0.11
SF3B2-208ENST00000529994 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
SF3B2-208ENST00000529994 DPF3Q92784 378 aa14.35□□□□□ -0.11
SF3B2-208ENST00000529994 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-208ENST00000529994 FAM84BQ96KN1 310 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-208ENST00000529994 PUS3Q9BZE2 481 aaKnown RBP14.35□□□□□ -0.11
SF3B2-208ENST00000529994 SNCAIPQ9Y6H5 919 aa14.35□□□□□ -0.11
SF3B2-208ENST00000529994 IRF6O14896 467 aa14.34□□□□□ -0.11
SF3B2-208ENST00000529994 CETPP11597 493 aa14.34□□□□□ -0.11
SF3B2-208ENST00000529994 WRNIP1Q96S55 665 aa14.34□□□□□ -0.11
SF3B2-208ENST00000529994 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
SF3B2-208ENST00000529994 CTGFP29279 349 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 SNAPC2Q13487 334 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 UBE4AQ14139 1066 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 ERO1BQ86YB8 467 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
SF3B2-208ENST00000529994 CPA4Q9UI42 421 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 FANCIQ9NVI1 1328 aa14.33□□□□□ -0.12
SF3B2-208ENST00000529994 GRM8O00222 908 aa14.32□□□□□ -0.12
SF3B2-208ENST00000529994 VAMP4O75379 141 aa14.32□□□□□ -0.12
SF3B2-208ENST00000529994 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
SF3B2-208ENST00000529994 VPS37DQ86XT2 251 aa14.32□□□□□ -0.12
SF3B2-208ENST00000529994 C9orf78Q9NZ63 289 aaPredicted RBP14.32□□□□□ -0.12
SF3B2-208ENST00000529994 AK9Q5TCS8 1911 aa14.32□□□□□ -0.12
SF3B2-208ENST00000529994 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
SF3B2-208ENST00000529994 PSMC4P43686 418 aa14.31□□□□□ -0.12
SF3B2-208ENST00000529994 MIGA2Q7L4E1 593 aa14.31□□□□□ -0.12
SF3B2-208ENST00000529994 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.31□□□□□ -0.12
SF3B2-208ENST00000529994 TEKT1Q969V4 418 aa14.31□□□□□ -0.12
SF3B2-208ENST00000529994 TRIM47Q96LD4 638 aa14.31□□□□□ -0.12
SF3B2-208ENST00000529994 GNRH1P01148 92 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 INPP5BP32019 993 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
SF3B2-208ENST00000529994 PPIL2Q13356 520 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 SLC4A10Q6U841 1118 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 RAET1EQ8TD07 263 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 SUCLG2Q96I99 432 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 TMOD2Q9NZR1 351 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 BIN2Q9UBW5 565 aaPredicted RBP14.3□□□□□ -0.12
SF3B2-208ENST00000529994 SRRDQ9UH36 339 aa14.3□□□□□ -0.12
SF3B2-208ENST00000529994 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
SF3B2-208ENST00000529994 OSBPP22059 807 aa14.29□□□□□ -0.12
SF3B2-208ENST00000529994 PRMT2P55345 433 aa14.29□□□□□ -0.12
SF3B2-208ENST00000529994 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
SF3B2-208ENST00000529994 ZCCHC17Q9NP64 241 aaKnown RBP14.29□□□□□ -0.12
SF3B2-208ENST00000529994 RIPOR2Q9Y4F9 1068 aa14.29□□□□□ -0.12
SF3B2-208ENST00000529994 IL16Q14005 1332 aa14.29□□□□□ -0.12
SF3B2-208ENST00000529994 PDHXO00330 501 aa14.28□□□□□ -0.12
SF3B2-208ENST00000529994 CCL5P13501 91 aa14.28□□□□□ -0.12
SF3B2-208ENST00000529994 GRK4P32298 578 aa14.28□□□□□ -0.12
SF3B2-208ENST00000529994 HDLBPQ00341 1268 aaKnown RBP14.28□□□□□ -0.12
SF3B2-208ENST00000529994 APOBEC3HQ6NTF7 200 aaKnown RBP14.28□□□□□ -0.12
SF3B2-208ENST00000529994 KAZALD1Q96I82 304 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms