RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 PTPN18Q99952 460 aa18.77■□□□□ 0.6
AP002884.3-204ENST00000529938 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
AP002884.3-204ENST00000529938 LRRC24Q50LG9 513 aa18.76■□□□□ 0.59
AP002884.3-204ENST00000529938 C15orf52Q6ZUT6 534 aaKnown RBP18.76■□□□□ 0.59
AP002884.3-204ENST00000529938 KIAA0825Q8IV33 1275 aa18.76■□□□□ 0.59
AP002884.3-204ENST00000529938 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 BCAR3O75815 825 aa18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 GJA5P36382 358 aa18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 ARHGEF6Q15052 776 aa18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 RBM27Q9P2N5 1060 aaKnown RBP18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 PTCH2Q9Y6C5 1203 aa18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 COL1A1P02452 1464 aaPredicted RBP18.75■□□□□ 0.59
AP002884.3-204ENST00000529938 ZNF646O15015 1829 aaPredicted RBP18.74■□□□□ 0.59
AP002884.3-204ENST00000529938 LAMB1P07942 1786 aa18.74■□□□□ 0.59
AP002884.3-204ENST00000529938 ZNF804AQ7Z570 1209 aa18.74■□□□□ 0.59
AP002884.3-204ENST00000529938 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
AP002884.3-204ENST00000529938 UBTFL1P0CB47 393 aaPredicted RBP18.73■□□□□ 0.59
AP002884.3-204ENST00000529938 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
AP002884.3-204ENST00000529938 SUPT20HL1Q3ZLR7 823 aa18.73■□□□□ 0.59
AP002884.3-204ENST00000529938 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
AP002884.3-204ENST00000529938 PPP2R3BQ9Y5P8 575 aa18.73■□□□□ 0.59
AP002884.3-204ENST00000529938 MROH5Q6ZUA9 1318 aa18.73■□□□□ 0.59
AP002884.3-204ENST00000529938 SSC5DA1L4H1 1573 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 IL1R1P14778 569 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 GYG1P46976 350 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 DLGAP5Q15398 846 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 METTL24Q5JXM2 366 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 ARHGAP45Q92619 1136 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
AP002884.3-204ENST00000529938 RANBP2P49792 3224 aaKnown RBP18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 USP2O75604 605 aaPredicted RBP18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 RFX5P48382 616 aaPredicted RBP18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 CERS5Q8N5B7 392 aa18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 FAM84BQ96KN1 310 aaPredicted RBP18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 MEIS3Q99687 375 aa18.71■□□□□ 0.59
AP002884.3-204ENST00000529938 F8W031 263 aaPredicted RBP18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 HIBADHP31937 336 aaKnown RBP18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 NBPF12Q5TAG4 269 aaPredicted RBP18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 ANKRD13AQ8IZ07 590 aa18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 MTMR14Q8NCE2 650 aa18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 DPF3Q92784 378 aa18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 MS4A4AQ96JQ5 239 aa18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 LRRFIP2Q9Y608 721 aaKnown RBP18.7■□□□□ 0.58
AP002884.3-204ENST00000529938 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
AP002884.3-204ENST00000529938 PDE8BO95263 885 aa18.69■□□□□ 0.58
AP002884.3-204ENST00000529938 TRIM27P14373 513 aa18.69■□□□□ 0.58
AP002884.3-204ENST00000529938 VGLL2Q8N8G2 317 aa18.69■□□□□ 0.58
AP002884.3-204ENST00000529938 CLUAP1Q96AJ1 413 aa18.69■□□□□ 0.58
AP002884.3-204ENST00000529938 ZFYVE28Q9HCC9 887 aa18.69■□□□□ 0.58
AP002884.3-204ENST00000529938 EYA2O00167 538 aa18.68■□□□□ 0.58
AP002884.3-204ENST00000529938 ATF7IPQ6VMQ6 1270 aa18.68■□□□□ 0.58
AP002884.3-204ENST00000529938 TDRD7Q8NHU6 1098 aaKnown RBP18.68■□□□□ 0.58
AP002884.3-204ENST00000529938 SH3TC2Q8TF17 1288 aa18.68■□□□□ 0.58
AP002884.3-204ENST00000529938 A0A1B0GUL6 1792 aa18.68■□□□□ 0.58
AP002884.3-204ENST00000529938 CUL9Q8IWT3 2517 aa18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 A0A0C4DFX4 3053 aa18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 TAF1CQ15572 869 aaPredicted RBP18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 SIL1Q9H173 461 aa18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 PRO3102Q9H379 93 aa18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 IQSEC3Q9UPP2 1182 aaPredicted RBP18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 PCDHAC2Q9Y5I4 1007 aa18.67■□□□□ 0.58
AP002884.3-204ENST00000529938 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 MYO1BO43795 1136 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 ATG9AQ7Z3C6 839 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 FBXO33Q7Z6M2 555 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 BRI3BPQ8WY22 251 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 ELP3Q9H9T3 547 aa18.66■□□□□ 0.58
AP002884.3-204ENST00000529938 BCAMP50895 628 aa18.65■□□□□ 0.58
AP002884.3-204ENST00000529938 PRMT6Q96LA8 375 aaPredicted RBP18.65■□□□□ 0.58
AP002884.3-204ENST00000529938 PA2G4Q9UQ80 394 aaKnown RBP18.65■□□□□ 0.58
AP002884.3-204ENST00000529938 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
AP002884.3-204ENST00000529938 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
AP002884.3-204ENST00000529938 FAM205AQ6ZU69 1335 aa18.65■□□□□ 0.58
AP002884.3-204ENST00000529938 COL6A3P12111 3177 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 SPDYE2BA6NHP3 402 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 SPDYE6P0CI01 402 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 FGFR2P21802 821 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 FKBP1AP62942 108 aaKnown RBP18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 RASA3Q14644 834 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 CAVIN4Q5BKX8 364 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 MFSD14BQ5SR56 506 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 SHISA4Q96DD7 197 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 VEZTQ9HBM0 779 aa18.64■□□□□ 0.57
AP002884.3-204ENST00000529938 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 FRAT2O75474 233 aaPredicted RBP18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 GNAI3P08754 354 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 GTF2A2P52657 109 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 CHAF1AQ13111 956 aaPredicted RBP18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 PUM3Q15397 648 aaKnown RBP18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 CCL15Q16663 113 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 ZKSCAN2Q63HK3 967 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 ARHGAP39Q9C0H5 1083 aa18.63■□□□□ 0.57
AP002884.3-204ENST00000529938 GNRH1P01148 92 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms