RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SHISA4Q96DD7 197 aa24.23■■□□□ 1.47
SSRP1-204ENST00000529002 RBM27Q9P2N5 1060 aaKnown RBP24.23■■□□□ 1.47
SSRP1-204ENST00000529002 FLIIQ13045 1269 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 IFIT5Q13325 482 aaKnown RBP24.22■■□□□ 1.47
SSRP1-204ENST00000529002 TNFAIP1Q13829 316 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 ARHGEF6Q15052 776 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 GRIK5Q16478 980 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 TWISTNBQ3B726 338 aaPredicted RBP24.22■■□□□ 1.47
SSRP1-204ENST00000529002 DZIP1LQ8IYY4 767 aaKnown RBP24.22■■□□□ 1.47
SSRP1-204ENST00000529002 DNAAF4Q8WXU2 420 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 MYH16Q9H6N6 1097 aa24.22■■□□□ 1.47
SSRP1-204ENST00000529002 LACTBP83111 547 aaPredicted RBP24.21■■□□□ 1.47
SSRP1-204ENST00000529002 EPHA10Q5JZY3 1008 aa24.21■■□□□ 1.47
SSRP1-204ENST00000529002 CACNA1FO60840 1977 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 FAM205AQ6ZU69 1335 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 BTBD19C9JJ37 291 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 CTGFP29279 349 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 GYG1P46976 350 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 CACNB3P54284 484 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 FKBP5Q13451 457 aaPredicted RBP24.2■■□□□ 1.46
SSRP1-204ENST00000529002 LINS1Q8NG48 757 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 DPF3Q92784 378 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 CSADQ9Y600 493 aa24.2■■□□□ 1.46
SSRP1-204ENST00000529002 TLR2O60603 784 aa24.19■■□□□ 1.46
SSRP1-204ENST00000529002 TDRD7Q8NHU6 1098 aaKnown RBP24.19■■□□□ 1.46
SSRP1-204ENST00000529002 SNCAIPQ9Y6H5 919 aa24.19■■□□□ 1.46
SSRP1-204ENST00000529002 CRKP46108 304 aa24.18■■□□□ 1.46
SSRP1-204ENST00000529002 LMBR1LQ6UX01 489 aa24.18■■□□□ 1.46
SSRP1-204ENST00000529002 SERPINA10Q9UK55 444 aa24.18■■□□□ 1.46
SSRP1-204ENST00000529002 SPDYE5A6NIY4 337 aa24.17■■□□□ 1.46
SSRP1-204ENST00000529002 F6X3S4 739 aa24.17■■□□□ 1.46
SSRP1-204ENST00000529002 ZKSCAN4Q969J2 545 aaPredicted RBP24.17■■□□□ 1.46
SSRP1-204ENST00000529002 IQSEC3Q9UPP2 1182 aaPredicted RBP24.17■■□□□ 1.46
SSRP1-204ENST00000529002 IRF6O14896 467 aa24.16■■□□□ 1.46
SSRP1-204ENST00000529002 KIF22Q14807 665 aa24.16■■□□□ 1.46
SSRP1-204ENST00000529002 LDHAL6AQ6ZMR3 332 aa24.16■■□□□ 1.46
SSRP1-204ENST00000529002 FAM84BQ96KN1 310 aaPredicted RBP24.16■■□□□ 1.46
SSRP1-204ENST00000529002 CNNM1Q9NRU3 951 aa24.16■■□□□ 1.46
SSRP1-204ENST00000529002 CPA4Q9UI42 421 aa24.16■■□□□ 1.46
SSRP1-204ENST00000529002 RANBP2P49792 3224 aaKnown RBP24.16■■□□□ 1.46
SSRP1-204ENST00000529002 CETPP11597 493 aa24.15■■□□□ 1.46
SSRP1-204ENST00000529002 TAF7LQ5H9L4 462 aa24.14■■□□□ 1.45
SSRP1-204ENST00000529002 WRNIP1Q96S55 665 aa24.14■■□□□ 1.45
SSRP1-204ENST00000529002 PUS3Q9BZE2 481 aaKnown RBP24.14■■□□□ 1.45
SSRP1-204ENST00000529002 HIBADHP31937 336 aaKnown RBP24.13■■□□□ 1.45
SSRP1-204ENST00000529002 TNNI2P48788 182 aa24.13■■□□□ 1.45
SSRP1-204ENST00000529002 ERO1BQ86YB8 467 aa24.13■■□□□ 1.45
SSRP1-204ENST00000529002 TRIM47Q96LD4 638 aa24.13■■□□□ 1.45
SSRP1-204ENST00000529002 PRKRIP1Q9H875 184 aaPredicted RBP24.13■■□□□ 1.45
SSRP1-204ENST00000529002 AK9Q5TCS8 1911 aa24.13■■□□□ 1.45
SSRP1-204ENST00000529002 MGAMO43451 1857 aa24.13■■□□□ 1.45
SSRP1-204ENST00000529002 DLL1O00548 723 aa24.12■■□□□ 1.45
SSRP1-204ENST00000529002 PSMC4P43686 418 aa24.12■■□□□ 1.45
SSRP1-204ENST00000529002 CHAF1AQ13111 956 aaPredicted RBP24.12■■□□□ 1.45
SSRP1-204ENST00000529002 CCDC57Q2TAC2 916 aa24.12■■□□□ 1.45
SSRP1-204ENST00000529002 C17orf99Q6UX52 265 aa24.12■■□□□ 1.45
SSRP1-204ENST00000529002 SNAPC2Q13487 334 aa24.11■■□□□ 1.45
SSRP1-204ENST00000529002 BEND3Q5T5X7 828 aa24.11■■□□□ 1.45
SSRP1-204ENST00000529002 SRRDQ9UH36 339 aa24.11■■□□□ 1.45
SSRP1-204ENST00000529002 WDHD1O75717 1129 aaPredicted RBP24.1■■□□□ 1.45
SSRP1-204ENST00000529002 OSBPP22059 807 aa24.1■■□□□ 1.45
SSRP1-204ENST00000529002 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.1■■□□□ 1.45
SSRP1-204ENST00000529002 PRO3102Q9H379 93 aa24.1■■□□□ 1.45
SSRP1-204ENST00000529002 CCL5P13501 91 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 PPIL2Q13356 520 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 UBE4AQ14139 1066 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 MIGA2Q7L4E1 593 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 UBE2Q1Q7Z7E8 422 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 WWC1Q8IX03 1113 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 SLC17A8Q8NDX2 589 aa24.09■■□□□ 1.45
SSRP1-204ENST00000529002 GNRH1P01148 92 aa24.08■■□□□ 1.45
SSRP1-204ENST00000529002 INPP5BP32019 993 aa24.08■■□□□ 1.45
SSRP1-204ENST00000529002 GRK4P32298 578 aa24.08■■□□□ 1.45
SSRP1-204ENST00000529002 PRMT2P55345 433 aa24.08■■□□□ 1.45
SSRP1-204ENST00000529002 RAET1EQ8TD07 263 aa24.08■■□□□ 1.45
SSRP1-204ENST00000529002 ZCCHC17Q9NP64 241 aaKnown RBP24.08■■□□□ 1.45
SSRP1-204ENST00000529002 RIPOR2Q9Y4F9 1068 aa24.08■■□□□ 1.45
SSRP1-204ENST00000529002 SOX1O00570 391 aaPredicted RBP24.07■■□□□ 1.44
SSRP1-204ENST00000529002 FMNL1O95466 1100 aaPredicted RBP24.07■■□□□ 1.44
SSRP1-204ENST00000529002 GJA8P48165 433 aa24.07■■□□□ 1.44
SSRP1-204ENST00000529002 RNF208Q9H0X6 261 aa24.07■■□□□ 1.44
SSRP1-204ENST00000529002 MYPNQ86TC9 1320 aa24.07■■□□□ 1.44
SSRP1-204ENST00000529002 ADGRA2Q96PE1 1338 aa24.07■■□□□ 1.44
SSRP1-204ENST00000529002 ALPK3Q96L96 1907 aa24.06■■□□□ 1.44
SSRP1-204ENST00000529002 DOCK3Q8IZD9 2030 aa24.06■■□□□ 1.44
SSRP1-204ENST00000529002 GRM8O00222 908 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 PDHXO00330 501 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 VAMP4O75379 141 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 GJB1P08034 283 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 CCDC184Q52MB2 194 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 FBXO33Q7Z6M2 555 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 TEKT1Q969V4 418 aa24.05■■□□□ 1.44
SSRP1-204ENST00000529002 BIN2Q9UBW5 565 aaPredicted RBP24.05■■□□□ 1.44
SSRP1-204ENST00000529002 ZBTB7BO15156 539 aaPredicted RBP24.04■■□□□ 1.44
SSRP1-204ENST00000529002 APOBEC3HQ6NTF7 200 aaKnown RBP24.04■■□□□ 1.44
SSRP1-204ENST00000529002 HTATIP2Q9BUP3 242 aa24.04■■□□□ 1.44
SSRP1-204ENST00000529002 FANCIQ9NVI1 1328 aa24.04■■□□□ 1.44
SSRP1-204ENST00000529002 PRKCZQ05513 592 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 PPATQ06203 517 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms