RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 NFKB1P19838 968 aa11.74□□□□□ -0.53
COMMD9-205ENST00000528608 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
COMMD9-205ENST00000528608 ADAM23O75077 832 aa11.73□□□□□ -0.53
COMMD9-205ENST00000528608 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
COMMD9-205ENST00000528608 ARSDP51689 593 aa11.73□□□□□ -0.53
COMMD9-205ENST00000528608 MYO19Q96H55 970 aa11.73□□□□□ -0.53
COMMD9-205ENST00000528608 FMN2Q9NZ56 1722 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 LOC100996750A0A140TA64 210 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 INPP5BP32019 993 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 C11orf91Q3C1V1 193 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 PRIMPOLQ96LW4 560 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 KRTAP4-6Q9BYQ5 205 aa11.72□□□□□ -0.53
COMMD9-205ENST00000528608 DNAJB12Q9NXW2 375 aaKnown RBP11.72□□□□□ -0.53
COMMD9-205ENST00000528608 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
COMMD9-205ENST00000528608 LILRB5O75023 590 aa11.71□□□□□ -0.53
COMMD9-205ENST00000528608 MICAL2O94851 1124 aa11.71□□□□□ -0.53
COMMD9-205ENST00000528608 FKBP5Q13451 457 aaPredicted RBP11.71□□□□□ -0.53
COMMD9-205ENST00000528608 C20orf204Q6ZNR8 217 aa11.71□□□□□ -0.53
COMMD9-205ENST00000528608 ZMIZ1Q9ULJ6 1067 aa11.71□□□□□ -0.53
COMMD9-205ENST00000528608 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
COMMD9-205ENST00000528608 ADGRB2O60241 1585 aa11.71□□□□□ -0.54
COMMD9-205ENST00000528608 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
COMMD9-205ENST00000528608 PRR36Q9H6K5 1346 aa11.7□□□□□ -0.54
COMMD9-205ENST00000528608 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 PRMT3O60678 531 aa11.7□□□□□ -0.54
COMMD9-205ENST00000528608 NID1P14543 1247 aa11.7□□□□□ -0.54
COMMD9-205ENST00000528608 COL9A3Q14050 684 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 ELOAQ14241 798 aaKnown RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 ZMYND15Q9H091 742 aa11.7□□□□□ -0.54
COMMD9-205ENST00000528608 JPH1Q9HDC5 661 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 AHDC1Q5TGY3 1603 aaPredicted RBP11.7□□□□□ -0.54
COMMD9-205ENST00000528608 USP32Q8NFA0 1604 aa11.7□□□□□ -0.54
COMMD9-205ENST00000528608 CENPJQ9HC77 1338 aaPredicted RBP11.69□□□□□ -0.54
COMMD9-205ENST00000528608 NHSL1Q5SYE7 1610 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 FAM229AH3BQW9 127 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 APBA3O96018 575 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 FURINP09958 794 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 GRNP28799 593 aaKnown RBP11.69□□□□□ -0.54
COMMD9-205ENST00000528608 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
COMMD9-205ENST00000528608 KRT25Q7Z3Z0 450 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 STK32AQ8WU08 396 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 IFT43Q96FT9 208 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 CARD11Q9BXL7 1154 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
COMMD9-205ENST00000528608 NUDT8Q8WV74 236 aa11.68□□□□□ -0.54
COMMD9-205ENST00000528608 CDK19Q9BWU1 502 aa11.68□□□□□ -0.54
COMMD9-205ENST00000528608 PSAPL1Q6NUJ1 521 aa11.67□□□□□ -0.54
COMMD9-205ENST00000528608 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
COMMD9-205ENST00000528608 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
COMMD9-205ENST00000528608 GATA4P43694 442 aa11.66□□□□□ -0.54
COMMD9-205ENST00000528608 XPCQ01831 940 aaPredicted RBP11.66□□□□□ -0.54
COMMD9-205ENST00000528608 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
COMMD9-205ENST00000528608 PMFBP1Q8TBY8 1022 aa11.66□□□□□ -0.54
COMMD9-205ENST00000528608 CCDC97Q96F63 343 aaPredicted RBP11.66□□□□□ -0.54
COMMD9-205ENST00000528608 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
COMMD9-205ENST00000528608 RARAP10276 462 aa11.65□□□□□ -0.54
COMMD9-205ENST00000528608 PCSK7Q16549 785 aa11.65□□□□□ -0.54
COMMD9-205ENST00000528608 TREML1Q86YW5 311 aa11.65□□□□□ -0.54
COMMD9-205ENST00000528608 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
COMMD9-205ENST00000528608 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
COMMD9-205ENST00000528608 ANKARQ7Z5J8 1434 aa11.65□□□□□ -0.54
COMMD9-205ENST00000528608 RGS9O75916 674 aaPredicted RBP11.64□□□□□ -0.55
COMMD9-205ENST00000528608 ATG7O95352 703 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 MAP3K6O95382 1288 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 OCLNQ16625 522 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 COX20Q5RI15 118 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 FAM35AQ86V20 835 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 NACC1Q96RE7 527 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 C11orf16Q9NQ32 467 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 ZFATQ9P243 1243 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 USP20Q9Y2K6 914 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
COMMD9-205ENST00000528608 JCADQ9P266 1359 aa11.64□□□□□ -0.55
COMMD9-205ENST00000528608 ATP7BP35670 1465 aa11.63□□□□□ -0.55
COMMD9-205ENST00000528608 PXDNQ92626 1479 aa11.63□□□□□ -0.55
COMMD9-205ENST00000528608 SASH3O75995 380 aa11.63□□□□□ -0.55
COMMD9-205ENST00000528608 CPB1P15086 417 aa11.63□□□□□ -0.55
COMMD9-205ENST00000528608 TARSP26639 723 aaKnown RBP11.63□□□□□ -0.55
COMMD9-205ENST00000528608 SRPK2P78362 688 aaKnown RBP11.63□□□□□ -0.55
COMMD9-205ENST00000528608 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
COMMD9-205ENST00000528608 RGL4Q8IZJ4 473 aa11.63□□□□□ -0.55
COMMD9-205ENST00000528608 NPHP3Q7Z494 1330 aa11.62□□□□□ -0.55
COMMD9-205ENST00000528608 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
COMMD9-205ENST00000528608 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
COMMD9-205ENST00000528608 DOC2BQ14184 412 aa11.62□□□□□ -0.55
COMMD9-205ENST00000528608 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
COMMD9-205ENST00000528608 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
COMMD9-205ENST00000528608 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
COMMD9-205ENST00000528608 EIF3AQ14152 1382 aaKnown RBP11.62□□□□□ -0.55
COMMD9-205ENST00000528608 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
COMMD9-205ENST00000528608 OPLAHO14841 1288 aa11.61□□□□□ -0.55
COMMD9-205ENST00000528608 ARID4AP29374 1257 aaPredicted RBP11.61□□□□□ -0.55
COMMD9-205ENST00000528608 RAC1P63000 192 aa11.61□□□□□ -0.55
COMMD9-205ENST00000528608 GRIK4Q16099 956 aa11.61□□□□□ -0.55
COMMD9-205ENST00000528608 TMEM164Q5U3C3 297 aa11.61□□□□□ -0.55
COMMD9-205ENST00000528608 C16orf46Q6P387 395 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms