RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 PDE11AQ9HCR9 933 aa8.58□□□□□ -1.04
SOX6-208ENST00000527619 CFAP45Q9UL16 551 aa8.58□□□□□ -1.04
SOX6-208ENST00000527619 SMAPO00193 183 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 CAPN15O75808 1086 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 TXLNAP40222 546 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 RWDD2BP57060 319 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 SAFB2Q14151 953 aaKnown RBP eCLIP8.57□□□□□ -1.04
SOX6-208ENST00000527619 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 TADA2BQ86TJ2 420 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 CCAR1Q8IX12 1150 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 CCDC26Q8TAB7 109 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 SH3GL3Q99963 347 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 TACO1Q9BSH4 297 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 IFNKQ9P0W0 207 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 KLHL42Q9P2K6 505 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 SUN2Q9UH99 717 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 MRFAP1Q9Y605 127 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 A0A087WUV0 522 aaPredicted RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 F6X3S4 739 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 CHL1O00533 1208 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 ZSCAN12O43309 604 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 IFIT2P09913 472 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 MYBL2P10244 700 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 RESTQ13127 1097 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 CDC37Q16543 378 aaPredicted RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 CCDC30Q5VVM6 783 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 LRRC31Q6UY01 552 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 CCDC73Q6ZRK6 1079 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 HDXQ7Z353 690 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 RUFY2Q8WXA3 655 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 TMX4Q9H1E5 349 aaPredicted RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 IL1RAPL2Q9NP60 686 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 C3P01024 1663 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 SETD1BQ9UPS6 1966 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 A0A087WWV3 80 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 PTH1RQ03431 593 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 ANKRD1Q15327 319 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 RPUSD2Q8IZ73 545 aaKnown RBP8.57□□□□□ -1.04
SOX6-208ENST00000527619 MIEF2Q96C03 454 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 BPIFA3Q9BQP9 254 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 LZTS2Q9BRK4 669 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 FAN1Q9Y2M0 1017 aa8.57□□□□□ -1.04
SOX6-208ENST00000527619 LMTK2Q8IWU2 1503 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 MYH15Q9Y2K3 1946 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 ARHGEF10O15013 1369 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 EIF5P55010 431 aaKnown RBP8.56□□□□□ -1.04
SOX6-208ENST00000527619 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 FAM107BQ9H098 131 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 GOLPH3LQ9H4A5 285 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 SOS1Q07889 1333 aaPredicted RBP8.56□□□□□ -1.04
SOX6-208ENST00000527619 VWA3AA6NCI4 1184 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 GOLGA6L9A6NEM1 432 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 FBLN1P23142 703 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 PSMA5P28066 241 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
SOX6-208ENST00000527619 MCM6Q14566 821 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 MAMSTRQ6ZN01 415 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 G2E3Q7L622 706 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
SOX6-208ENST00000527619 SYNPO2Q9UMS6 1093 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 AKAP2Q9Y2D5 859 aa8.56□□□□□ -1.04
SOX6-208ENST00000527619 ITSN1Q15811 1721 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 A6NJR5 290 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 TMCO5BA8MYB1 307 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 POTEB2H3BUK9 544 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 FAM160A1Q05DH4 1040 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 RASA3Q14644 834 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 NECTIN1Q15223 517 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 PDCD2Q16342 344 aaPredicted RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 BEND6Q5SZJ8 279 aaPredicted RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 FAM71BQ8TC56 605 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 NPATQ14207 1427 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 NEXMIFQ5QGS0 1516 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 TNRQ92752 1358 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 ANKRD65E5RJM6 399 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 C21orf2O43822 256 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 ERLIN1O75477 346 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 USP5P45974 858 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 PUS10Q3MIT2 529 aaKnown RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 ENGASEQ8NFI3 743 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 GPATCH3Q96I76 525 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 UTP14AQ9BVJ6 771 aaKnown RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 ALDH8A1Q9H2A2 487 aaPredicted RBP8.55□□□□□ -1.04
SOX6-208ENST00000527619 EMILIN1Q9Y6C2 1016 aa8.55□□□□□ -1.04
SOX6-208ENST00000527619 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
SOX6-208ENST00000527619 USP8P40818 1118 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 GNG11P61952 73 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 LONRF3Q496Y0 759 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 HSP90B2PQ58FF3 399 aa8.54□□□□□ -1.04
SOX6-208ENST00000527619 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms