RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 ADGRE1Q14246 886 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 KCTD2Q14681 263 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
VPS26B-204ENST00000527586 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 GGA1Q9UJY5 639 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 ATRXP46100 2492 aa9.4□□□□□ -0.91
VPS26B-204ENST00000527586 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 GNAT3A8MTJ3 354 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 PDHXO00330 501 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 MMP14P50281 582 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 KIAA0825Q8IV33 1275 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 TIFAQ96CG3 184 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 RRP7AQ9Y3A4 280 aaKnown RBP9.39□□□□□ -0.91
VPS26B-204ENST00000527586 CSADQ9Y600 493 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 USP34Q70CQ2 3546 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
VPS26B-204ENST00000527586 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 SPDYE5A6NIY4 337 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 TNPO2O14787 897 aaKnown RBP9.38□□□□□ -0.91
VPS26B-204ENST00000527586 IRF6O14896 467 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 BCRP11274 1271 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 DLGAP5Q15398 846 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 RNPC3Q96LT9 517 aaKnown RBP9.38□□□□□ -0.91
VPS26B-204ENST00000527586 VEZTQ9HBM0 779 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 NUP98P52948 1817 aa9.38□□□□□ -0.91
VPS26B-204ENST00000527586 MYL6BP14649 208 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 TRIM32Q13049 653 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 RASA3Q14644 834 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 ANKRD23Q86SG2 305 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 BADQ92934 168 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 TRMT112Q9UI30 125 aaKnown RBP9.37□□□□□ -0.91
VPS26B-204ENST00000527586 WDFY4Q6ZS81 3184 aa9.37□□□□□ -0.91
VPS26B-204ENST00000527586 TLL1O43897 1013 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 GFRA3O60609 400 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 HMGCRP04035 888 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 RPS8P62241 208 aaKnown RBP9.36□□□□□ -0.91
VPS26B-204ENST00000527586 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 COL9A2Q14055 689 aaPredicted RBP9.36□□□□□ -0.91
VPS26B-204ENST00000527586 STRIP1Q5VSL9 837 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 ERO1BQ86YB8 467 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS26B-204ENST00000527586 PCDHAC2Q9Y5I4 1007 aa9.36□□□□□ -0.91
VPS26B-204ENST00000527586 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
VPS26B-204ENST00000527586 ZFHX2Q9C0A1 2572 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-204ENST00000527586 SH3TC1Q8TE82 1336 aa9.35□□□□□ -0.91
VPS26B-204ENST00000527586 ANKRD36CQ5JPF3 1778 aa9.35□□□□□ -0.91
VPS26B-204ENST00000527586 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-204ENST00000527586 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-204ENST00000527586 MYO1BO43795 1136 aa9.35□□□□□ -0.91
VPS26B-204ENST00000527586 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
VPS26B-204ENST00000527586 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
VPS26B-204ENST00000527586 PARK7Q99497 189 aaKnown RBP9.35□□□□□ -0.91
VPS26B-204ENST00000527586 CD320Q9NPF0 282 aa9.35□□□□□ -0.91
VPS26B-204ENST00000527586 ERC2O15083 957 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 CYP2C8P10632 490 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 ATN1P54259 1190 aaPredicted RBP9.34□□□□□ -0.91
VPS26B-204ENST00000527586 PPIL2Q13356 520 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 SENP6Q9GZR1 1112 aaPredicted RBP9.34□□□□□ -0.91
VPS26B-204ENST00000527586 PRDM5Q9NQX1 630 aaPredicted RBP9.34□□□□□ -0.91
VPS26B-204ENST00000527586 KCNH4Q9UQ05 1017 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 SNCAIPQ9Y6H5 919 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 LAMB2P55268 1798 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 CEMIPQ8WUJ3 1361 aa9.34□□□□□ -0.91
VPS26B-204ENST00000527586 C5orf42Q9H799 3197 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 RTP1P59025 263 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
VPS26B-204ENST00000527586 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 CDAN1Q8IWY9 1227 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.33□□□□□ -0.92
VPS26B-204ENST00000527586 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 ANKS1AQ92625 1134 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 ZNF428Q96B54 188 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 COA7Q96BR5 231 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 OTOFQ9HC10 1997 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 PTPRZ1P23471 2315 aaPredicted RBP9.33□□□□□ -0.92
VPS26B-204ENST00000527586 PSME4Q14997 1843 aa9.33□□□□□ -0.92
VPS26B-204ENST00000527586 COL4A1P02462 1669 aa9.32□□□□□ -0.92
VPS26B-204ENST00000527586 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
VPS26B-204ENST00000527586 TTLL5Q6EMB2 1281 aa9.32□□□□□ -0.92
VPS26B-204ENST00000527586 PRMT6Q96LA8 375 aaPredicted RBP9.32□□□□□ -0.92
VPS26B-204ENST00000527586 ATP11BQ9Y2G3 1177 aa9.32□□□□□ -0.92
VPS26B-204ENST00000527586 AOX1Q06278 1338 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 SPDYE2BA6NHP3 402 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 SPDYE6P0CI01 402 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 ATP2B4P23634 1241 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 EPHB4P54760 987 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 CFAP100Q494V2 611 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 ZKSCAN4Q969J2 545 aaPredicted RBP9.31□□□□□ -0.92
VPS26B-204ENST00000527586 XDHP47989 1333 aa9.31□□□□□ -0.92
VPS26B-204ENST00000527586 ALADP13716 330 aa9.3□□□□□ -0.92
VPS26B-204ENST00000527586 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
VPS26B-204ENST00000527586 PBX2P40425 430 aa9.3□□□□□ -0.92
VPS26B-204ENST00000527586 ID4P47928 161 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms