RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 CHD4Q14839 1912 aa7.91□□□□□ -1.14
SF3B2-205ENST00000526653 ADAM23O75077 832 aa7.91□□□□□ -1.14
SF3B2-205ENST00000526653 HTRA3P83110 453 aa7.91□□□□□ -1.14
SF3B2-205ENST00000526653 CDK19Q9BWU1 502 aa7.91□□□□□ -1.14
SF3B2-205ENST00000526653 MKRN1Q9UHC7 482 aaKnown RBP7.91□□□□□ -1.14
SF3B2-205ENST00000526653 ACEP12821 1306 aa7.91□□□□□ -1.14
SF3B2-205ENST00000526653 KIF1BO60333 1816 aa7.9□□□□□ -1.14
SF3B2-205ENST00000526653 CASZ1Q86V15 1759 aa7.9□□□□□ -1.14
SF3B2-205ENST00000526653 PSMA6P60900 246 aaKnown RBP7.9□□□□□ -1.14
SF3B2-205ENST00000526653 LARGE2Q8N3Y3 721 aa7.9□□□□□ -1.14
SF3B2-205ENST00000526653 NEUROD4Q9HD90 331 aa7.9□□□□□ -1.14
SF3B2-205ENST00000526653 NOP53Q9NZM5 478 aaKnown RBP7.9□□□□□ -1.14
SF3B2-205ENST00000526653 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
SF3B2-205ENST00000526653 ABCA3Q99758 1704 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 CRB1P82279 1406 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 PALM3A6NDB9 673 aaPredicted RBP7.89□□□□□ -1.15
SF3B2-205ENST00000526653 SYT9Q86SS6 491 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 SIX5Q8N196 739 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 RHPN1Q8TCX5 695 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 HCN4Q9Y3Q4 1203 aa7.89□□□□□ -1.15
SF3B2-205ENST00000526653 CPDO75976 1380 aa7.88□□□□□ -1.15
SF3B2-205ENST00000526653 PNPLA7Q6ZV29 1317 aa7.88□□□□□ -1.15
SF3B2-205ENST00000526653 SFI1A8K8P3 1242 aa7.88□□□□□ -1.15
SF3B2-205ENST00000526653 M0R2N6 131 aa7.88□□□□□ -1.15
SF3B2-205ENST00000526653 DKK1O94907 266 aa7.88□□□□□ -1.15
SF3B2-205ENST00000526653 SFSWAPQ12872 951 aaKnown RBP7.88□□□□□ -1.15
SF3B2-205ENST00000526653 TSEN2Q8NCE0 465 aaKnown RBP7.88□□□□□ -1.15
SF3B2-205ENST00000526653 ZNF594Q96JF6 807 aaPredicted RBP7.88□□□□□ -1.15
SF3B2-205ENST00000526653 PIK3C2GO75747 1445 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 SHANK3Q9BYB0 1731 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 ELOA3CA0A087WX78 387 aaPredicted RBP7.87□□□□□ -1.15
SF3B2-205ENST00000526653 ELOA3DA6NLF2 546 aaPredicted RBP7.87□□□□□ -1.15
SF3B2-205ENST00000526653 C1QTNF9BB2RNN3 333 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 TOMM70O94826 608 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 HIRAP54198 1017 aaPredicted RBP7.87□□□□□ -1.15
SF3B2-205ENST00000526653 ELOA3BQ3SY89 546 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 C1orf53Q5VUE5 145 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 MSL1Q68DK7 614 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 ELOA3Q8NG57 546 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 TRIM11Q96F44 468 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 HSH2DQ96JZ2 352 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 MPHOSPH9Q99550 1183 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 SLC30A3Q99726 388 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 MDFIQ99750 246 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 PHACTR1Q9C0D0 580 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 CHMP3Q9Y3E7 222 aa7.87□□□□□ -1.15
SF3B2-205ENST00000526653 SPATA31E1Q6ZUB1 1445 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 EIF3AQ14152 1382 aaKnown RBP7.86□□□□□ -1.15
SF3B2-205ENST00000526653 SIN3BO75182 1162 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 CD163Q86VB7 1156 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 GLMNQ92990 594 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 CARD10Q9BWT7 1032 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
SF3B2-205ENST00000526653 ATP7BP35670 1465 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 TRPM3Q9HCF6 1732 aaPredicted RBP7.86□□□□□ -1.15
SF3B2-205ENST00000526653 ALS2Q96Q42 1657 aa7.86□□□□□ -1.15
SF3B2-205ENST00000526653 USP19O94966 1318 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 WDR17Q8IZU2 1322 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 PPLO60437 1756 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 K7ELQ4 463 aaPredicted RBP7.85□□□□□ -1.15
SF3B2-205ENST00000526653 C21orf2O43822 256 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 FURINP09958 794 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 ALAS2P22557 587 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 CHRNA4P43681 627 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 COL23A1Q86Y22 540 aaPredicted RBP7.85□□□□□ -1.15
SF3B2-205ENST00000526653 PLVAPQ9BX97 442 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 MAFBQ9Y5Q3 323 aaPredicted RBP7.85□□□□□ -1.15
SF3B2-205ENST00000526653 PCNTO95613 3336 aa7.85□□□□□ -1.15
SF3B2-205ENST00000526653 COL5A2P05997 1499 aaPredicted RBP7.85□□□□□ -1.15
SF3B2-205ENST00000526653 AATKQ6ZMQ8 1374 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 ADARB2-AS1A8MUL3 147 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 PPP1R12BO60237 982 aaPredicted RBP7.84□□□□□ -1.15
SF3B2-205ENST00000526653 RASA1P20936 1047 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 JMYQ8N9B5 988 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 ZNF280CQ8ND82 737 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 SYTL4Q96C24 671 aaPredicted RBP7.84□□□□□ -1.15
SF3B2-205ENST00000526653 SUSD3Q96L08 255 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 CEP63Q96MT8 703 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 ANKIB1Q9P2G1 1089 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 RBM19Q9Y4C8 960 aaKnown RBP7.84□□□□□ -1.15
SF3B2-205ENST00000526653 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 BCL9O00512 1426 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 USP6P35125 1406 aa7.84□□□□□ -1.15
SF3B2-205ENST00000526653 TYRO3Q06418 890 aa7.83□□□□□ -1.16
SF3B2-205ENST00000526653 SPEM2Q0P670 501 aa7.83□□□□□ -1.16
SF3B2-205ENST00000526653 RAB44Q7Z6P3 723 aaPredicted RBP7.83□□□□□ -1.16
SF3B2-205ENST00000526653 DDX54Q8TDD1 881 aaKnown RBP7.83□□□□□ -1.16
SF3B2-205ENST00000526653 DCAF11Q8TEB1 546 aa7.83□□□□□ -1.16
SF3B2-205ENST00000526653 NMRK2Q9NPI5 230 aa7.83□□□□□ -1.16
SF3B2-205ENST00000526653 NLRP2Q9NX02 1062 aa7.83□□□□□ -1.16
SF3B2-205ENST00000526653 IFT172Q9UG01 1749 aa7.83□□□□□ -1.16
SF3B2-205ENST00000526653 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
SF3B2-205ENST00000526653 ARHGEF25Q86VW2 580 aa7.82□□□□□ -1.16
SF3B2-205ENST00000526653 C16orf71Q8IYS4 520 aaPredicted RBP7.82□□□□□ -1.16
SF3B2-205ENST00000526653 ALDH16A1Q8IZ83 802 aa7.82□□□□□ -1.16
SF3B2-205ENST00000526653 TNFRSF25Q93038 417 aa7.82□□□□□ -1.16
SF3B2-205ENST00000526653 C2orf49Q9BVC5 232 aaPredicted RBP7.82□□□□□ -1.16
SF3B2-205ENST00000526653 POLR3AO14802 1390 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms