RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 LARP6Q9BRS8 491 aaKnown RBP13.95□□□□□ -0.18
FGFR1-227ENST00000526570 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 RAD51AP2Q09MP3 1159 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 DDX17Q92841 729 aaKnown RBP13.95□□□□□ -0.18
FGFR1-227ENST00000526570 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
FGFR1-227ENST00000526570 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
FGFR1-227ENST00000526570 TMEM2Q9UHN6 1383 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 CFAP58Q5T655 872 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 DACT1Q9NYF0 836 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 NLRP5P59047 1200 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 ST5P78524 1137 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 NUCB1Q02818 461 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 IP6K1Q92551 441 aa13.95□□□□□ -0.18
FGFR1-227ENST00000526570 ZNF215Q9UL58 517 aaPredicted RBP13.95□□□□□ -0.18
FGFR1-227ENST00000526570 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
FGFR1-227ENST00000526570 POLR3DP05423 398 aaPredicted RBP13.94□□□□□ -0.18
FGFR1-227ENST00000526570 CETN2P41208 172 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 CDC5LQ99459 802 aaKnown RBP13.94□□□□□ -0.18
FGFR1-227ENST00000526570 MAP3K19Q56UN5 1328 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 TSC22D3Q99576 134 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 MINDY4BA8MYZ0 360 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 HIP1RO75146 1068 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 PSMD2Q13200 908 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.94□□□□□ -0.18
FGFR1-227ENST00000526570 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 PRDM4Q9UKN5 801 aa13.94□□□□□ -0.18
FGFR1-227ENST00000526570 MAP3K12Q12852 859 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 ZNF513Q8N8E2 541 aaPredicted RBP13.93□□□□□ -0.18
FGFR1-227ENST00000526570 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 IKBKGQ9Y6K9 419 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 TMED1Q13445 227 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 RASEFQ8IZ41 740 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 VPS41P49754 854 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 VAV2P52735 878 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 ERCC6LQ2NKX8 1250 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 ALDH3A1P30838 453 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 KRT32Q14532 448 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
FGFR1-227ENST00000526570 FKBP15Q5T1M5 1219 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
FGFR1-227ENST00000526570 LTKP29376 864 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
FGFR1-227ENST00000526570 PARD3Q8TEW0 1356 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 F13A1P00488 732 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
FGFR1-227ENST00000526570 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 ZSCAN20P17040 1043 aaPredicted RBP13.92□□□□□ -0.18
FGFR1-227ENST00000526570 POLE2P56282 527 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 GRIPAP1Q4V328 841 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■□□ 15.2
FGFR1-227ENST00000526570 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 RNF123Q5XPI4 1314 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 ACTN2P35609 894 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 ZNF75DP51815 510 aa13.92□□□□□ -0.18
FGFR1-227ENST00000526570 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
FGFR1-227ENST00000526570 PCDH11XQ9BZA7 1347 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 PCDH11YQ9BZA8 1340 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
FGFR1-227ENST00000526570 CHMP2AO43633 222 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 LRRC45Q96CN5 670 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 TRIM35Q9UPQ4 493 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 ZWINTO95229 277 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 VIMP08670 466 aaKnown RBP13.91□□□□□ -0.18
FGFR1-227ENST00000526570 PRR16Q569H4 304 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 GSDMBQ8TAX9 411 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 CXorf56Q9H5V9 222 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 RAD50Q92878 1312 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 MAGEA9P43362 315 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 CHMP4BP1P59074 171 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 CCDC152Q4G0S7 254 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 HSP90AA5PQ58FG0 334 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 TTC22Q5TAA0 569 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 NAPBQ9H115 298 aa13.91□□□□□ -0.18
FGFR1-227ENST00000526570 ZCCHC11Q5TAX3 1644 aaKnown RBP13.91□□□□□ -0.18
FGFR1-227ENST00000526570 COL17A1Q9UMD9 1497 aaPredicted RBP13.91□□□□□ -0.18
FGFR1-227ENST00000526570 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
FGFR1-227ENST00000526570 CCDC170Q8IYT3 715 aa13.9□□□□□ -0.18
FGFR1-227ENST00000526570 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
FGFR1-227ENST00000526570 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
FGFR1-227ENST00000526570 CDKL5O76039 1030 aa13.9□□□□□ -0.18
FGFR1-227ENST00000526570 VPS36Q86VN1 386 aa13.9□□□□□ -0.18
FGFR1-227ENST00000526570 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
FGFR1-227ENST00000526570 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms