RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 OTOP1Q7RTM1 612 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 ERO1AQ96HE7 468 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 PUS3Q9BZE2 481 aaKnown RBP14.78□□□□□ -0.04
CAPN1-204ENST00000526468 ZNF70Q9UC06 446 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-204ENST00000526468 SERPINA10Q9UK55 444 aa14.78□□□□□ -0.04
CAPN1-204ENST00000526468 IQSEC3Q9UPP2 1182 aaPredicted RBP14.78□□□□□ -0.04
CAPN1-204ENST00000526468 MKI67P46013 3256 aaKnown RBP14.77□□□□□ -0.04
CAPN1-204ENST00000526468 MROH5Q6ZUA9 1318 aa14.77□□□□□ -0.04
CAPN1-204ENST00000526468 UNCXA6NJT0 531 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 TCP10L2B9ZVM9 353 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 OTUD7BQ6GQQ9 843 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 TDRD7Q8NHU6 1098 aaKnown RBP14.77□□□□□ -0.05
CAPN1-204ENST00000526468 CD99L2Q8TCZ2 262 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 OPTNQ96CV9 577 aa14.77□□□□□ -0.05
CAPN1-204ENST00000526468 BICC1Q9H694 974 aaKnown RBP14.77□□□□□ -0.05
CAPN1-204ENST00000526468 TDRD3Q9H7E2 651 aaKnown RBP14.77□□□□□ -0.05
CAPN1-204ENST00000526468 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
CAPN1-204ENST00000526468 NBPF7P0C2Y1 421 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-204ENST00000526468 CRKP46108 304 aa14.76□□□□□ -0.05
CAPN1-204ENST00000526468 TNNI2P48788 182 aa14.76□□□□□ -0.05
CAPN1-204ENST00000526468 METTL24Q5JXM2 366 aa14.76□□□□□ -0.05
CAPN1-204ENST00000526468 DZIP1LQ8IYY4 767 aaKnown RBP14.76□□□□□ -0.05
CAPN1-204ENST00000526468 TMEM39BQ9GZU3 492 aa14.76□□□□□ -0.05
CAPN1-204ENST00000526468 PHIPQ8WWQ0 1821 aa14.76□□□□□ -0.05
CAPN1-204ENST00000526468 TRIOBPQ9H2D6 2365 aa14.75□□□□□ -0.05
CAPN1-204ENST00000526468 FRAT2O75474 233 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-204ENST00000526468 USP2O75604 605 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-204ENST00000526468 VGLL4Q14135 290 aa14.75□□□□□ -0.05
CAPN1-204ENST00000526468 KAZALD1Q96I82 304 aa14.75□□□□□ -0.05
CAPN1-204ENST00000526468 FAM84BQ96KN1 310 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-204ENST00000526468 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
CAPN1-204ENST00000526468 CSADQ9Y600 493 aa14.75□□□□□ -0.05
CAPN1-204ENST00000526468 CDK5RAP2Q96SN8 1893 aa14.74□□□□□ -0.05
CAPN1-204ENST00000526468 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
CAPN1-204ENST00000526468 OTUD5Q96G74 571 aa14.74□□□□□ -0.05
CAPN1-204ENST00000526468 TEPSINQ96N21 525 aa14.74□□□□□ -0.05
CAPN1-204ENST00000526468 TMOD2Q9NZR1 351 aa14.74□□□□□ -0.05
CAPN1-204ENST00000526468 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-204ENST00000526468 MAST2Q6P0Q8 1798 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 UTYO14607 1347 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 MAST3O60307 1309 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 CCL15-CCL14A0A0B4J2E2 113 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 CACNB3P54284 484 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 TAF1CQ15572 869 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-204ENST00000526468 GRIK5Q16478 980 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 CCL15Q16663 113 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 RABL6Q3YEC7 729 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-204ENST00000526468 LRRC24Q50LG9 513 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 CAVIN4Q5BKX8 364 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 ANKRD44Q8N8A2 993 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 TBC1D22AQ8WUA7 517 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 TEKT1Q969V4 418 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 EFCC1Q9HA90 598 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 DOCK3Q8IZD9 2030 aa14.73□□□□□ -0.05
CAPN1-204ENST00000526468 SP3Q02447 781 aa14.72□□□□□ -0.05
CAPN1-204ENST00000526468 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-204ENST00000526468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.72□□□□□ -0.05
CAPN1-204ENST00000526468 BRI3BPQ8WY22 251 aa14.72□□□□□ -0.05
CAPN1-204ENST00000526468 PTPN18Q99952 460 aa14.72□□□□□ -0.05
CAPN1-204ENST00000526468 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
CAPN1-204ENST00000526468 RIPOR2Q9Y4F9 1068 aa14.72□□□□□ -0.05
CAPN1-204ENST00000526468 PTPRCP08575 1304 aa14.71□□□□□ -0.05
CAPN1-204ENST00000526468 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
CAPN1-204ENST00000526468 INTS3Q68E01 1043 aaKnown RBP14.71□□□□□ -0.05
CAPN1-204ENST00000526468 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
CAPN1-204ENST00000526468 KLHDC4Q8TBB5 520 aa14.71□□□□□ -0.05
CAPN1-204ENST00000526468 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
CAPN1-204ENST00000526468 MYO5AQ9Y4I1 1855 aaKnown RBP14.7□□□□□ -0.06
CAPN1-204ENST00000526468 TESPA1A2RU30 521 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-204ENST00000526468 GTF2A2P52657 109 aa14.7□□□□□ -0.06
CAPN1-204ENST00000526468 MAP3K9P80192 1104 aa14.7□□□□□ -0.06
CAPN1-204ENST00000526468 PUM3Q15397 648 aaKnown RBP14.7□□□□□ -0.06
CAPN1-204ENST00000526468 FBXO33Q7Z6M2 555 aa14.7□□□□□ -0.06
CAPN1-204ENST00000526468 MRPL50Q8N5N7 158 aaKnown RBP14.7□□□□□ -0.06
CAPN1-204ENST00000526468 WRNIP1Q96S55 665 aa14.7□□□□□ -0.06
CAPN1-204ENST00000526468 FOCADQ5VW36 1801 aa14.7□□□□□ -0.06
CAPN1-204ENST00000526468 KIF16BQ96L93 1317 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 SPDYE5A6NIY4 337 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 PDE8BO95263 885 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 IFIT1P09914 478 aaKnown RBP14.69□□□□□ -0.06
CAPN1-204ENST00000526468 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
CAPN1-204ENST00000526468 CAP1Q01518 475 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 ARMC5Q96C12 935 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 ZFYVE28Q9HCC9 887 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 PCDH10Q9P2E7 1040 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 SNCAIPQ9Y6H5 919 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 LOC285556D6RIA3 1793 aa14.69□□□□□ -0.06
CAPN1-204ENST00000526468 WDHD1O75717 1129 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-204ENST00000526468 NEFLP07196 543 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 SLC5A1P13866 664 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 BCAMP50895 628 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 HOOK2Q96ED9 719 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 ZDHHC15Q96MV8 337 aa14.68□□□□□ -0.06
CAPN1-204ENST00000526468 PTCH2Q9Y6C5 1203 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms