RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SHISA5Q8N114 240 aa8.56□□□□□ -1.04
CSDE1-210ENST00000525878 LIN7BQ9HAP6 207 aa8.56□□□□□ -1.04
CSDE1-210ENST00000525878 CTSBP07858 339 aa8.55□□□□□ -1.04
CSDE1-210ENST00000525878 TAL1P17542 331 aaPredicted RBP8.55□□□□□ -1.04
CSDE1-210ENST00000525878 RXRBP28702 533 aa8.55□□□□□ -1.04
CSDE1-210ENST00000525878 MSMPQ1L6U9 139 aa8.55□□□□□ -1.04
CSDE1-210ENST00000525878 FBLIM1Q8WUP2 373 aa8.55□□□□□ -1.04
CSDE1-210ENST00000525878 GOLGA2P5Q9HBQ8 144 aa8.55□□□□□ -1.04
CSDE1-210ENST00000525878 PAX4O43316 350 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 ADH5P11766 374 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 FOSL1P15407 271 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 SERPINB4P48594 390 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 USPL1Q5W0Q7 1092 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 B4GALNT3Q6L9W6 998 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 GIMAP7Q8NHV1 300 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 FAM129BQ96TA1 746 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 BRPF3Q9ULD4 1205 aa8.54□□□□□ -1.04
CSDE1-210ENST00000525878 B3GALT4O96024 378 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 CYP11A1P05108 521 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 MAOBP27338 520 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 USP11P51784 963 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 NFKBIBQ15653 356 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 PAOXQ6QHF9 649 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 FBXL6Q8N531 539 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 GATA6Q92908 595 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
CSDE1-210ENST00000525878 PRKAG2Q9UGJ0 569 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 LEMD3Q9Y2U8 911 aa8.53□□□□□ -1.04
CSDE1-210ENST00000525878 H3BRB1 525 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 IGHA2P01877 340 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 ITPKAP23677 461 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 ADMP35318 185 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 POU4F3Q15319 338 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 OSBPL1AQ9BXW6 950 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 TUT1Q9H6E5 874 aaKnown RBP8.52□□□□□ -1.05
CSDE1-210ENST00000525878 ADGRE2Q9UHX3 823 aa8.52□□□□□ -1.05
CSDE1-210ENST00000525878 PRNPP04156 253 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 NEFLP07196 543 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 ZAR1Q86SH2 424 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 GLYCTKQ8IVS8 523 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-210ENST00000525878 GSX1Q9H4S2 264 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-210ENST00000525878 ZNF576Q9H609 170 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 ACTL7BQ9Y614 415 aa8.51□□□□□ -1.05
CSDE1-210ENST00000525878 CITED4Q96RK1 184 aa8.5□□□□□ -1.05
CSDE1-210ENST00000525878 YIPF2Q9BWQ6 316 aa8.5□□□□□ -1.05
CSDE1-210ENST00000525878 NDUFB5O43674 189 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 ECEL1O95672 775 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
CSDE1-210ENST00000525878 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 ORC1Q13415 861 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 HP1BP3Q5SSJ5 553 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-210ENST00000525878 TXNDC2Q86VQ3 553 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 ACSS3Q9H6R3 686 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 ZFYVE1Q9HBF4 777 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 CCDC39Q9UFE4 941 aa8.49□□□□□ -1.05
CSDE1-210ENST00000525878 CPNE3O75131 537 aaKnown RBP8.48□□□□□ -1.05
CSDE1-210ENST00000525878 TXKP42681 527 aa8.48□□□□□ -1.05
CSDE1-210ENST00000525878 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
CSDE1-210ENST00000525878 TBC1D32Q96NH3 1257 aa8.48□□□□□ -1.05
CSDE1-210ENST00000525878 SEMA6CQ9H3T2 930 aa8.48□□□□□ -1.05
CSDE1-210ENST00000525878 NPHS2Q9NP85 383 aa8.48□□□□□ -1.05
CSDE1-210ENST00000525878 SYNGAP1Q96PV0 1343 aa8.48□□□□□ -1.05
CSDE1-210ENST00000525878 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-210ENST00000525878 NFICP08651 508 aa8.47□□□□□ -1.05
CSDE1-210ENST00000525878 SEZ6L2Q6UXD5 910 aa8.47□□□□□ -1.05
CSDE1-210ENST00000525878 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
CSDE1-210ENST00000525878 DNAJC25Q9H1X3 360 aa8.47□□□□□ -1.05
CSDE1-210ENST00000525878 EHD4Q9H223 541 aa8.47□□□□□ -1.05
CSDE1-210ENST00000525878 ABCB6Q9NP58 842 aa8.47□□□□□ -1.05
CSDE1-210ENST00000525878 FAM105AQ9NUU6 356 aa8.47□□□□□ -1.05
CSDE1-210ENST00000525878 FAM170BA6NMN3 283 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 GPR182O15218 404 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 MAP7Q14244 749 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 ABI1Q8IZP0 508 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 KRTAP9-9Q9BYP9 154 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 KRTAP9-4Q9BYQ2 154 aa8.46□□□□□ -1.06
CSDE1-210ENST00000525878 EIF1AYO14602 144 aaKnown RBP8.45□□□□□ -1.06
CSDE1-210ENST00000525878 CYP26A1O43174 497 aa8.45□□□□□ -1.06
CSDE1-210ENST00000525878 RPS26P11Q5JNZ5 115 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-210ENST00000525878 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
CSDE1-210ENST00000525878 DYMQ7RTS9 669 aa8.45□□□□□ -1.06
CSDE1-210ENST00000525878 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
CSDE1-210ENST00000525878 CCDC74AQ96AQ1 378 aa8.45□□□□□ -1.06
CSDE1-210ENST00000525878 C1GALT1Q9NS00 363 aa8.45□□□□□ -1.06
CSDE1-210ENST00000525878 AOC2O75106 756 aa8.44□□□□□ -1.06
CSDE1-210ENST00000525878 CBLL1Q75N03 491 aa8.44□□□□□ -1.06
CSDE1-210ENST00000525878 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
CSDE1-210ENST00000525878 GLIS3Q8NEA6 775 aa8.44□□□□□ -1.06
CSDE1-210ENST00000525878 WDR18Q9BV38 432 aa8.44□□□□□ -1.06
CSDE1-210ENST00000525878 BSDC1Q9NW68 430 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-210ENST00000525878 ANGEL1Q9UNK9 670 aaKnown RBP8.44□□□□□ -1.06
CSDE1-210ENST00000525878 TMEM238LA0A1B0GVL6 79 aa8.43□□□□□ -1.06
CSDE1-210ENST00000525878 RAB6AP20340 208 aa8.43□□□□□ -1.06
CSDE1-210ENST00000525878 AP3B2Q13367 1082 aa8.43□□□□□ -1.06
CSDE1-210ENST00000525878 RAD18Q9NS91 495 aa8.43□□□□□ -1.06
CSDE1-210ENST00000525878 RNF114Q9Y508 228 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms