RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 SCAF8Q9UPN6 1271 aaKnown RBP17.74■□□□□ 0.43
LRRK1-204ENST00000525617 PCDHAC2Q9Y5I4 1007 aa17.74■□□□□ 0.43
LRRK1-204ENST00000525617 ECM29Q5VYK3 1845 aa17.74■□□□□ 0.43
LRRK1-204ENST00000525617 CLRN2A0PK11 232 aa17.73■□□□□ 0.43
LRRK1-204ENST00000525617 HUNKP57058 714 aa17.73■□□□□ 0.43
LRRK1-204ENST00000525617 GRIK5Q16478 980 aa17.73■□□□□ 0.43
LRRK1-204ENST00000525617 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
LRRK1-204ENST00000525617 VEZTQ9HBM0 779 aa17.73■□□□□ 0.43
LRRK1-204ENST00000525617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
LRRK1-204ENST00000525617 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
LRRK1-204ENST00000525617 COL1A1P02452 1464 aaPredicted RBP17.72■□□□□ 0.43
LRRK1-204ENST00000525617 LDHBP07195 334 aaKnown RBP17.72■□□□□ 0.43
LRRK1-204ENST00000525617 FKBP1BP68106 108 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 GRM1Q13255 1194 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 TNFAIP1Q13829 316 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 TNNI3KQ59H18 835 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 CAPNS2Q96L46 248 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 PPP2R3BQ9Y5P8 575 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 FPGT-TNNI3KV9GXZ4 949 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
LRRK1-204ENST00000525617 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
LRRK1-204ENST00000525617 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
LRRK1-204ENST00000525617 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
LRRK1-204ENST00000525617 PRAMEF18Q5VWM3 479 aa17.71■□□□□ 0.43
LRRK1-204ENST00000525617 CYP4F22Q6NT55 531 aa17.71■□□□□ 0.43
LRRK1-204ENST00000525617 DEFB129Q9H1M3 183 aa17.71■□□□□ 0.43
LRRK1-204ENST00000525617 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
LRRK1-204ENST00000525617 EXOC6BQ9Y2D4 811 aa17.71■□□□□ 0.43
LRRK1-204ENST00000525617 UQCRFS1P1P0C7P4 283 aa17.7■□□□□ 0.42
LRRK1-204ENST00000525617 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
LRRK1-204ENST00000525617 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
LRRK1-204ENST00000525617 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
LRRK1-204ENST00000525617 HHIPL2Q6UWX4 724 aa17.7■□□□□ 0.42
LRRK1-204ENST00000525617 ZDHHC15Q96MV8 337 aa17.7■□□□□ 0.42
LRRK1-204ENST00000525617 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
LRRK1-204ENST00000525617 ZNF70Q9UC06 446 aaPredicted RBP17.7■□□□□ 0.42
LRRK1-204ENST00000525617 CEP350Q5VT06 3117 aa17.69■□□□□ 0.42
LRRK1-204ENST00000525617 PRDX5P30044 214 aa17.69■□□□□ 0.42
LRRK1-204ENST00000525617 TNNI2P48788 182 aa17.69■□□□□ 0.42
LRRK1-204ENST00000525617 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
LRRK1-204ENST00000525617 TTC39AQ5SRH9 613 aa17.69■□□□□ 0.42
LRRK1-204ENST00000525617 ABCF2Q9UG63 623 aa17.69■□□□□ 0.42
LRRK1-204ENST00000525617 ARID4AP29374 1257 aaPredicted RBP17.68■□□□□ 0.42
LRRK1-204ENST00000525617 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
LRRK1-204ENST00000525617 RGMBQ6NW40 437 aa17.68■□□□□ 0.42
LRRK1-204ENST00000525617 SLF2Q8IX21 1173 aa17.68■□□□□ 0.42
LRRK1-204ENST00000525617 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
LRRK1-204ENST00000525617 PAPPA2Q9BXP8 1791 aa17.68■□□□□ 0.42
LRRK1-204ENST00000525617 MAP2K2P36507 400 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 MAP2K1Q02750 393 aaPredicted RBP17.67■□□□□ 0.42
LRRK1-204ENST00000525617 RASA3Q14644 834 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 DZIP1Q86YF9 867 aaKnown RBP17.67■□□□□ 0.42
LRRK1-204ENST00000525617 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 HMG20BQ9P0W2 317 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 AOX1Q06278 1338 aa17.67■□□□□ 0.42
LRRK1-204ENST00000525617 TCP10L2B9ZVM9 353 aa17.66■□□□□ 0.42
LRRK1-204ENST00000525617 RAB11FIP3O75154 756 aa17.66■□□□□ 0.42
LRRK1-204ENST00000525617 HSPA1AP0DMV8 641 aaKnown RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 HSPA1BP0DMV9 641 aaKnown RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 ZNF157P51786 506 aaPredicted RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 APOBEC3HQ6NTF7 200 aaKnown RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
LRRK1-204ENST00000525617 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 RHPN1Q8TCX5 695 aa17.66■□□□□ 0.42
LRRK1-204ENST00000525617 AIDAQ96BJ3 306 aa17.66■□□□□ 0.42
LRRK1-204ENST00000525617 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 CCDC8Q9H0W5 538 aaPredicted RBP17.66■□□□□ 0.42
LRRK1-204ENST00000525617 APBB1O00213 710 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 PPP1R12BO60237 982 aaPredicted RBP17.65■□□□□ 0.42
LRRK1-204ENST00000525617 MCAMP43121 646 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 NOGQ13253 232 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 PRKG1Q13976 671 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 DIXDC1Q155Q3 683 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 AACSQ86V21 672 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 ZNF512BQ96KM6 892 aaPredicted RBP17.65■□□□□ 0.42
LRRK1-204ENST00000525617 BEGAINQ9BUH8 593 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 DAGLAQ9Y4D2 1042 aa17.65■□□□□ 0.42
LRRK1-204ENST00000525617 UBE2Q2LH0YL09 131 aa17.64■□□□□ 0.41
LRRK1-204ENST00000525617 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.41
LRRK1-204ENST00000525617 PI16Q6UXB8 463 aa17.64■□□□□ 0.41
LRRK1-204ENST00000525617 IL1RAPL2Q9NP60 686 aa17.64■□□□□ 0.41
LRRK1-204ENST00000525617 LRP2BPQ9P2M1 347 aa17.64■□□□□ 0.41
LRRK1-204ENST00000525617 DBNLQ9UJU6 430 aaKnown RBP17.64■□□□□ 0.41
LRRK1-204ENST00000525617 ANGEL1Q9UNK9 670 aaKnown RBP17.64■□□□□ 0.41
LRRK1-204ENST00000525617 AOC2O75106 756 aa17.63■□□□□ 0.41
LRRK1-204ENST00000525617 CACNB3P54284 484 aa17.63■□□□□ 0.41
LRRK1-204ENST00000525617 GSTO1P78417 241 aa17.63■□□□□ 0.41
LRRK1-204ENST00000525617 NBPF12Q5TAG4 269 aaPredicted RBP17.63■□□□□ 0.41
LRRK1-204ENST00000525617 MOB2Q70IA6 237 aa17.63■□□□□ 0.41
LRRK1-204ENST00000525617 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
LRRK1-204ENST00000525617 RAI14Q9P0K7 980 aa17.63■□□□□ 0.41
LRRK1-204ENST00000525617 MYH2Q9UKX2 1941 aa17.62■□□□□ 0.41
LRRK1-204ENST00000525617 LDHCP07864 332 aa17.62■□□□□ 0.41
LRRK1-204ENST00000525617 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
LRRK1-204ENST00000525617 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
LRRK1-204ENST00000525617 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms