RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 NDUFA8P51970 172 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 BRD3Q15059 726 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 SWT1Q5T5J6 900 aaKnown RBP12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 ENGASEQ8NFI3 743 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 GDAP1L1Q96MZ0 367 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 JPH2Q9BR39 696 aaPredicted RBP12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 ANKZF1Q9H8Y5 726 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 ADKP55263 362 aaKnown RBP12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 RAI14Q9P0K7 980 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
CLNS1A-204ENST00000525428 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 HNRNPH1P31943 449 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 KCNJ6P48051 423 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 CASP8Q14790 479 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 CEP89Q96ST8 783 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 PPFIA4O75335 1185 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 GLRX3O76003 335 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 SCP2P22307 547 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 CCT5P48643 541 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 NMIQ13287 307 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 PPP2R5AQ15172 486 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 SF3A1Q15459 793 aaKnown RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 SOS2Q07890 1332 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 UBAP1LF5GYI3 381 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 RPS6KA5O75582 802 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 MTX1Q13505 466 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 RIN2Q8WYP3 895 aaPredicted RBP12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
CLNS1A-204ENST00000525428 EXOC5O00471 708 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 VSNL1P62760 191 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 BAG1Q99933 345 aaPredicted RBP12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 PXDNQ92626 1479 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 A0A0U1RQJ8 604 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 RNF40O75150 1001 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 ERLIN1O75477 346 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 NCAPHQ15003 741 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 SSH3Q8TE77 659 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
CLNS1A-204ENST00000525428 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 LRRIQ3A6PVS8 624 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 MTF1Q14872 753 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 NFAT5O94916 1531 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 FMR1NBQ8N0W7 255 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 FANCLQ9NW38 375 aa12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 MED1Q15648 1581 aaPredicted RBP12.91□□□□□ -0.34
CLNS1A-204ENST00000525428 ARHGAP6O43182 974 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 EHD4Q9H223 541 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 LGR6Q9HBX8 967 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 A0A0D9SFI3 127 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 CUTAO60888 179 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 POLR3DP05423 398 aaPredicted RBP12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 Q6ZUG5 572 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 FAM71BQ8TC56 605 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 MED4Q9NPJ6 270 aa12.9□□□□□ -0.34
CLNS1A-204ENST00000525428 CPP00450 1065 aa12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 SATB1Q01826 763 aa12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 TTC19Q6DKK2 380 aaPredicted RBP12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 AFAP1L1Q8TED9 768 aa12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 MRPL44Q9H9J2 332 aaKnown RBP12.9□□□□□ -0.35
CLNS1A-204ENST00000525428 SCRN1Q12765 414 aa12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 NCOA5Q9HCD5 579 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 FAM169AQ9Y6X4 670 aa12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
CLNS1A-204ENST00000525428 CCDC196A0A1B0GTZ2 297 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 H0YHG0 523 aa12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-204ENST00000525428 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms