RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 TEPSINQ96N21 525 aa14.77□□□□□ -0.05
NDUFS3-204ENST00000525378 UNCXA6NJT0 531 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 TCP10L2B9ZVM9 353 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 PDE8BO95263 885 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 CHAF1AQ13111 956 aaPredicted RBP14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 TNFAIP1Q13829 316 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 FBXO46Q6PJ61 603 aaPredicted RBP14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 VPS37DQ86XT2 251 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 ANKRD13AQ8IZ07 590 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 TMEM39BQ9GZU3 492 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 USP44Q9H0E7 712 aa14.76□□□□□ -0.05
NDUFS3-204ENST00000525378 PDE4DIPQ5VU43 2346 aa14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 E9PSI1 815 aa14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 SLC34A2O95436 690 aa14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 BCAMP50895 628 aa14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 SLFN5Q08AF3 891 aa14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 ELP3Q9H9T3 547 aa14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 TNRC18O15417 2968 aaPredicted RBP14.75□□□□□ -0.05
NDUFS3-204ENST00000525378 CAVIN4Q5BKX8 364 aa14.74□□□□□ -0.05
NDUFS3-204ENST00000525378 OPTNQ96CV9 577 aa14.74□□□□□ -0.05
NDUFS3-204ENST00000525378 CDCA7LQ96GN5 454 aa14.74□□□□□ -0.05
NDUFS3-204ENST00000525378 PTPN18Q99952 460 aa14.74□□□□□ -0.05
NDUFS3-204ENST00000525378 AK9Q5TCS8 1911 aa14.74□□□□□ -0.05
NDUFS3-204ENST00000525378 TESPA1A2RU30 521 aaPredicted RBP14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 FRAT2O75474 233 aaPredicted RBP14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 FGFR2P21802 821 aa14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 RFX5P48382 616 aaPredicted RBP14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 CACNB3P54284 484 aa14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 CRHR2Q13324 411 aa14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 TBC1D22AQ8WUA7 517 aa14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 TRIM17Q9Y577 477 aa14.73□□□□□ -0.05
NDUFS3-204ENST00000525378 TNNI2P48788 182 aa14.72□□□□□ -0.05
NDUFS3-204ENST00000525378 HDLBPQ00341 1268 aaKnown RBP14.72□□□□□ -0.05
NDUFS3-204ENST00000525378 OTOP1Q7RTM1 612 aa14.72□□□□□ -0.05
NDUFS3-204ENST00000525378 MS4A4AQ96JQ5 239 aa14.72□□□□□ -0.05
NDUFS3-204ENST00000525378 IFIT1P09914 478 aaKnown RBP14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 MAP3K9P80192 1104 aa14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 CAP1Q01518 475 aa14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 VGLL4Q14135 290 aa14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 PUM3Q15397 648 aaKnown RBP14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 ALDH1L2Q3SY69 923 aa14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.71□□□□□ -0.051e-6■□□□□ 11.1
NDUFS3-204ENST00000525378 CD99L2Q8TCZ2 262 aa14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 TEKT1Q969V4 418 aa14.71□□□□□ -0.05
NDUFS3-204ENST00000525378 KIF16BQ96L93 1317 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 EYA2O00167 538 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 OTUD7BQ6GQQ9 843 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 APOBEC3HQ6NTF7 200 aaKnown RBP14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 ATG9AQ7Z3C6 839 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 MRIQ9BWK5 157 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 ZSWIM8A7E2V4 1837 aa14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 RBBP6Q7Z6E9 1792 aaKnown RBP14.7□□□□□ -0.06
NDUFS3-204ENST00000525378 MYH2Q9UKX2 1941 aa14.69□□□□□ -0.06
NDUFS3-204ENST00000525378 TRMT2AQ8IZ69 625 aaKnown RBP14.69□□□□□ -0.06
NDUFS3-204ENST00000525378 BRI3BPQ8WY22 251 aa14.69□□□□□ -0.06
NDUFS3-204ENST00000525378 ERO1AQ96HE7 468 aa14.69□□□□□ -0.06
NDUFS3-204ENST00000525378 SMC4Q9NTJ3 1288 aa14.69□□□□□ -0.06
NDUFS3-204ENST00000525378 CCL15-CCL14A0A0B4J2E2 113 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 SLC5A1P13866 664 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 SP3Q02447 781 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 CCL15Q16663 113 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 LPIN2Q92539 896 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 PTPN22Q9Y2R2 807 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 SUGT1Q9Y2Z0 365 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 CSADQ9Y600 493 aa14.68□□□□□ -0.06
NDUFS3-204ENST00000525378 MAST3O60307 1309 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 HHIPL2Q6UWX4 724 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 FAM83AQ86UY5 434 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 FAM43AQ8N2R8 423 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 SIL1Q9H173 461 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 TMOD2Q9NZR1 351 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 SNCAIPQ9Y6H5 919 aa14.67□□□□□ -0.06
NDUFS3-204ENST00000525378 POTEFA5A3E0 1075 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 SPDYE5A6NIY4 337 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 UBTFL1P0CB47 393 aaPredicted RBP14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 GTF2A2P52657 109 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 TAF1CQ15572 869 aaPredicted RBP14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 FKBP1CQ5VVH2 108 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 WDR66Q8TBY9 1149 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 ZKSCAN4Q969J2 545 aaPredicted RBP14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 WRNIP1Q96S55 665 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 EFCC1Q9HA90 598 aa14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 KIAA0100Q14667 2235 aaKnown RBP14.66□□□□□ -0.06
NDUFS3-204ENST00000525378 RPAP1Q9BWH6 1393 aaPredicted RBP14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 PRDX5P30044 214 aa14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 DIXDC1Q155Q3 683 aa14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 PRPF38BQ5VTL8 546 aaKnown RBP14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 MIGA2Q7L4E1 593 aa14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 ZFYVE28Q9HCC9 887 aa14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 PA2G4Q9UQ80 394 aaKnown RBP14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 DAGLAQ9Y4D2 1042 aa14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 LRRFIP2Q9Y608 721 aaKnown RBP14.65□□□□□ -0.06
NDUFS3-204ENST00000525378 IRF6O14896 467 aa14.64□□□□□ -0.07
NDUFS3-204ENST00000525378 CIAO1O76071 339 aa14.64□□□□□ -0.07
NDUFS3-204ENST00000525378 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms