RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 ANLNQ9NQW6 1124 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 PRAM1Q96QH2 718 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 RIPOR2Q9Y4F9 1068 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 DAPK3O43293 454 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 BIRC2Q13490 618 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 WTAPQ15007 396 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 DBN1Q16643 649 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 TUBBP07437 444 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 RASIP1Q5U651 963 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 PROSER2Q86WR7 435 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-202ENST00000525284 IL1RL1Q01638 556 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
LRRK1-202ENST00000525284 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-202ENST00000525284 BRF1Q92994 677 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 F6X3S4 739 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 SYF2O95926 243 aaKnown RBP15.31■□□□□ 0.04
LRRK1-202ENST00000525284 PLIN2Q99541 437 aa15.31■□□□□ 0.04
LRRK1-202ENST00000525284 TBC1D9Q6ZT07 1266 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 TSPY3P0CV98 308 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 TSPY8P0CW00 308 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 TSHZ3Q63HK5 1081 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.3■□□□□ 0.04
LRRK1-202ENST00000525284 KRT15P19012 456 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 RPS6KA2Q15349 733 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 CASC4Q6P4E1 433 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 BMP15O95972 392 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 APOEP02649 317 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
LRRK1-202ENST00000525284 SCAPERQ9BY12 1400 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 CFTRP13569 1480 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
LRRK1-202ENST00000525284 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
LRRK1-202ENST00000525284 CDR2Q01850 454 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 TYRO3Q06418 890 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 HS2ST1Q7LGA3 356 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 BCAP29Q9UHQ4 241 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 BAG3O95817 575 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 HAUS8Q9BT25 410 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 CAPN7Q9Y6W3 813 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 ZBTB43O43298 467 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 NAPAP54920 295 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 PDCD2Q16342 344 aaPredicted RBP15.29■□□□□ 0.04
LRRK1-202ENST00000525284 NXNQ6DKJ4 435 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 C6orf50Q9HD87 102 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
LRRK1-202ENST00000525284 GOLGA6BA6NDN3 693 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 CCT6AP40227 531 aaKnown RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 ASIC3Q9UHC3 531 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 DNM1Q05193 864 aaKnown RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 IFT20Q8IY31 132 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 FAM71BQ8TC56 605 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 NAPGQ99747 312 aaPredicted RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 DNAJC8O75937 253 aaPredicted RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 TCEANC2Q96MN5 208 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 STX10O60499 249 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 STK10O94804 968 aaKnown RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 RTN1Q16799 776 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 MYCBPQ99417 103 aaPredicted RBP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
LRRK1-202ENST00000525284 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
LRRK1-202ENST00000525284 KRT3P12035 628 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 IRX4P78413 519 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 ERO1AQ96HE7 468 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 CCDC125Q86Z20 511 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 HMGB1P1B2RPK0 211 aaPredicted RBP15.27■□□□□ 0.04
LRRK1-202ENST00000525284 AKR1B15C9JRZ8 316 aaPredicted RBP15.27■□□□□ 0.04
LRRK1-202ENST00000525284 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.04
LRRK1-202ENST00000525284 RUFY4Q6ZNE9 571 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 GABPB2Q8TAK5 448 aaPredicted RBP15.27■□□□□ 0.04
LRRK1-202ENST00000525284 PRDM11Q9NQV5 511 aa15.27■□□□□ 0.04
LRRK1-202ENST00000525284 CNGA1P29973 690 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 RASSF2P50749 326 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 SH3BGRP55822 239 aaPredicted RBP15.27■□□□□ 0.03
LRRK1-202ENST00000525284 KRT79Q5XKE5 535 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 KSR1Q8IVT5 923 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 Q9H521 79 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 TRIM35Q9UPQ4 493 aa15.27■□□□□ 0.03
LRRK1-202ENST00000525284 FAN1Q9Y2M0 1017 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms