RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
BEST1-204ENST00000524926 PROM2Q8N271 834 aa18.03■□□□□ 0.48
BEST1-204ENST00000524926 DDX11Q96FC9 970 aa18.03■□□□□ 0.48
BEST1-204ENST00000524926 HIBADHP31937 336 aaKnown RBP18.02■□□□□ 0.48
BEST1-204ENST00000524926 GRAPQ13588 217 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 USP48Q86UV5 1035 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 LCORLQ8N3X6 602 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 GRAPLQ8TC17 118 aaPredicted RBP18.02■□□□□ 0.48
BEST1-204ENST00000524926 NBPF3Q9H094 633 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
BEST1-204ENST00000524926 ANKIB1Q9P2G1 1089 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 TCHHQ07283 1943 aa18.02■□□□□ 0.48
BEST1-204ENST00000524926 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.47
BEST1-204ENST00000524926 ST5P78524 1137 aa18.02■□□□□ 0.47
BEST1-204ENST00000524926 TBC1D10CQ8IV04 446 aa18.02■□□□□ 0.47
BEST1-204ENST00000524926 ZNF274Q96GC6 653 aaPredicted RBP18.02■□□□□ 0.47
BEST1-204ENST00000524926 SLC4A4Q9Y6R1 1079 aa18.02■□□□□ 0.47
BEST1-204ENST00000524926 TNRC6CQ9HCJ0 1690 aaKnown RBP18.02■□□□□ 0.47
BEST1-204ENST00000524926 FSD2A1L4K1 749 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 PRKAB2O43741 272 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 GNAT2P19087 354 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 ALX1Q15699 326 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 CDC37L1Q7L3B6 337 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 FAM184AQ8NB25 1140 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 RPGRQ92834 1020 aaKnown RBP18.01■□□□□ 0.47
BEST1-204ENST00000524926 FBXL16Q8N461 479 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 LLPHQ9BRT6 129 aaKnown RBP18.01■□□□□ 0.47
BEST1-204ENST00000524926 NACAP1Q9BZK3 213 aa18.01■□□□□ 0.47
BEST1-204ENST00000524926 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
BEST1-204ENST00000524926 EPB41L4AQ9HCS5 686 aaPredicted RBP18.01■□□□□ 0.47
BEST1-204ENST00000524926 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
BEST1-204ENST00000524926 GSG1L2A8MUP6 293 aa18■□□□□ 0.47
BEST1-204ENST00000524926 TDO2P48775 406 aa18■□□□□ 0.47
BEST1-204ENST00000524926 FERMT3Q86UX7 667 aa18■□□□□ 0.47
BEST1-204ENST00000524926 NSFL1CQ9UNZ2 370 aaKnown RBP18■□□□□ 0.47
BEST1-204ENST00000524926 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
BEST1-204ENST00000524926 SEMA3EO15041 775 aa18■□□□□ 0.47
BEST1-204ENST00000524926 MBD3O95983 291 aa18■□□□□ 0.47
BEST1-204ENST00000524926 ANTXR2P58335 489 aa18■□□□□ 0.47
BEST1-204ENST00000524926 ADGRA1Q86SQ6 560 aa18■□□□□ 0.47
BEST1-204ENST00000524926 APBA3O96018 575 aa17.99■□□□□ 0.47
BEST1-204ENST00000524926 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
BEST1-204ENST00000524926 DNM1Q05193 864 aaKnown RBP17.99■□□□□ 0.47
BEST1-204ENST00000524926 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
BEST1-204ENST00000524926 RBM27Q9P2N5 1060 aaKnown RBP17.99■□□□□ 0.47
BEST1-204ENST00000524926 MAGEB6P1A0A0J9YX57 407 aa17.99■□□□□ 0.47
BEST1-204ENST00000524926 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
BEST1-204ENST00000524926 NSUN7Q8NE18 718 aaKnown RBP17.99■□□□□ 0.47
BEST1-204ENST00000524926 SMARCC2Q8TAQ2 1214 aa17.99■□□□□ 0.47
BEST1-204ENST00000524926 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 B4E1Z4 1266 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 H3BQV1 296 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 FIBPO43427 364 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 GADD45BO75293 160 aaPredicted RBP17.98■□□□□ 0.47
BEST1-204ENST00000524926 EVCP57679 992 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 CTDSPL2Q05D32 466 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 IFFO2Q5TF58 517 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
BEST1-204ENST00000524926 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 INCENPQ9NQS7 918 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 CTDNEP1O95476 244 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 ZSCAN23Q3MJ62 389 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 TPRNQ4KMQ1 711 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 CHMP4CQ96CF2 233 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 BRPF3Q9ULD4 1205 aa17.98■□□□□ 0.47
BEST1-204ENST00000524926 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
BEST1-204ENST00000524926 CYB5R4Q7L1T6 521 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 GAS2L3Q86XJ1 694 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 WDR19Q8NEZ3 1342 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 NEDD4P46934 1319 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 DDR1Q08345 913 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 SDR42E1Q8WUS8 393 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 ISY1Q9ULR0 285 aaKnown RBP17.97■□□□□ 0.47
BEST1-204ENST00000524926 JAG2Q9Y219 1238 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 LEMD3Q9Y2U8 911 aa17.97■□□□□ 0.47
BEST1-204ENST00000524926 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.47
BEST1-204ENST00000524926 KIF3AQ9Y496 699 aa17.96■□□□□ 0.47
BEST1-204ENST00000524926 GOLGA8BA8MQT2 603 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 POLRMTO00411 1230 aaKnown RBP17.96■□□□□ 0.46
BEST1-204ENST00000524926 PLSCR1O15162 318 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 XRCC6P12956 609 aaKnown RBP eCLIP17.96■□□□□ 0.46
BEST1-204ENST00000524926 MRE11P49959 708 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 CRY2Q49AN0 593 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 FAM173BQ6P4H8 233 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 TOMM22Q9NS69 142 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 TMEM63CQ9P1W3 806 aa17.96■□□□□ 0.46
BEST1-204ENST00000524926 ANGEL1Q9UNK9 670 aaKnown RBP17.96■□□□□ 0.46
BEST1-204ENST00000524926 XDHP47989 1333 aa17.95■□□□□ 0.46
BEST1-204ENST00000524926 FOSBP53539 338 aa17.95■□□□□ 0.46
BEST1-204ENST00000524926 ZNF827Q17R98 1081 aa17.95■□□□□ 0.46
BEST1-204ENST00000524926 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms