RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
HIF3A-208ENST00000524533 ANKRD13AQ8IZ07 590 aa20.42■□□□□ 0.86
HIF3A-208ENST00000524533 VGLL2Q8N8G2 317 aa20.42■□□□□ 0.86
HIF3A-208ENST00000524533 KLHDC4Q8TBB5 520 aa20.42■□□□□ 0.86
HIF3A-208ENST00000524533 USP2O75604 605 aaPredicted RBP20.41■□□□□ 0.86
HIF3A-208ENST00000524533 SLFN5Q08AF3 891 aa20.41■□□□□ 0.86
HIF3A-208ENST00000524533 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
HIF3A-208ENST00000524533 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
HIF3A-208ENST00000524533 R3HDMLQ9H3Y0 253 aa20.41■□□□□ 0.86
HIF3A-208ENST00000524533 TCP10L2B9ZVM9 353 aa20.4■□□□□ 0.86
HIF3A-208ENST00000524533 TNNI2P48788 182 aa20.4■□□□□ 0.86
HIF3A-208ENST00000524533 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
HIF3A-208ENST00000524533 IGF2BP3O00425 579 aaKnown RBP eCLIP20.39■□□□□ 0.85
HIF3A-208ENST00000524533 PUM3Q15397 648 aaKnown RBP20.39■□□□□ 0.85
HIF3A-208ENST00000524533 GRIK5Q16478 980 aa20.39■□□□□ 0.85
HIF3A-208ENST00000524533 FBXO46Q6PJ61 603 aaPredicted RBP20.39■□□□□ 0.85
HIF3A-208ENST00000524533 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
HIF3A-208ENST00000524533 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 GJA5P36382 358 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 HDLBPQ00341 1268 aaKnown RBP20.38■□□□□ 0.85
HIF3A-208ENST00000524533 CDAN1Q8IWY9 1227 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 TEKT1Q969V4 418 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 TEPSINQ96N21 525 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 TMEM39BQ9GZU3 492 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 ELP3Q9H9T3 547 aa20.38■□□□□ 0.85
HIF3A-208ENST00000524533 MAST3O60307 1309 aa20.37■□□□□ 0.85
HIF3A-208ENST00000524533 IFIT1P09914 478 aaKnown RBP20.37■□□□□ 0.85
HIF3A-208ENST00000524533 BCAMP50895 628 aa20.37■□□□□ 0.85
HIF3A-208ENST00000524533 OTUD7BQ6GQQ9 843 aa20.37■□□□□ 0.85
HIF3A-208ENST00000524533 CDCA7LQ96GN5 454 aa20.37■□□□□ 0.85
HIF3A-208ENST00000524533 FGFR2P21802 821 aa20.36■□□□□ 0.85
HIF3A-208ENST00000524533 OPTNQ96CV9 577 aa20.36■□□□□ 0.85
HIF3A-208ENST00000524533 EYA2O00167 538 aa20.35■□□□□ 0.85
HIF3A-208ENST00000524533 RFX5P48382 616 aaPredicted RBP20.35■□□□□ 0.85
HIF3A-208ENST00000524533 CACNB3P54284 484 aa20.35■□□□□ 0.85
HIF3A-208ENST00000524533 TMOD2Q9NZR1 351 aa20.35■□□□□ 0.85
HIF3A-208ENST00000524533 SLC5A1P13866 664 aa20.34■□□□□ 0.85
HIF3A-208ENST00000524533 SUGT1Q9Y2Z0 365 aa20.34■□□□□ 0.85
HIF3A-208ENST00000524533 CSADQ9Y600 493 aa20.34■□□□□ 0.85
HIF3A-208ENST00000524533 TESPA1A2RU30 521 aaPredicted RBP20.33■□□□□ 0.85
HIF3A-208ENST00000524533 UBTFL1P0CB47 393 aaPredicted RBP20.33■□□□□ 0.85
HIF3A-208ENST00000524533 CRHR2Q13324 411 aa20.33■□□□□ 0.85
HIF3A-208ENST00000524533 VGLL4Q14135 290 aa20.33■□□□□ 0.85
HIF3A-208ENST00000524533 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.33■□□□□ 0.85
HIF3A-208ENST00000524533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.33■□□□□ 0.85
HIF3A-208ENST00000524533 LPIN2Q92539 896 aa20.33■□□□□ 0.85
HIF3A-208ENST00000524533 ZDHHC15Q96MV8 337 aa20.33■□□□□ 0.85
HIF3A-208ENST00000524533 TRIM17Q9Y577 477 aa20.33■□□□□ 0.85
HIF3A-208ENST00000524533 PDE4DIPQ5VU43 2346 aa20.32■□□□□ 0.84
HIF3A-208ENST00000524533 MAP3K9P80192 1104 aa20.32■□□□□ 0.84
HIF3A-208ENST00000524533 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
HIF3A-208ENST00000524533 ERO1AQ96HE7 468 aa20.32■□□□□ 0.84
HIF3A-208ENST00000524533 PTPN18Q99952 460 aa20.32■□□□□ 0.84
HIF3A-208ENST00000524533 CT47B1P0C2W7 299 aaPredicted RBP20.31■□□□□ 0.84
HIF3A-208ENST00000524533 OTOP1Q7RTM1 612 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 FAM83AQ86UY5 434 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 WDR66Q8TBY9 1149 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 MRIQ9BWK5 157 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 SIL1Q9H173 461 aa20.31■□□□□ 0.84
HIF3A-208ENST00000524533 RPAP1Q9BWH6 1393 aaPredicted RBP20.31■□□□□ 0.84
HIF3A-208ENST00000524533 FKBP1CQ5VVH2 108 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 APOBEC3HQ6NTF7 200 aaKnown RBP20.3■□□□□ 0.84
HIF3A-208ENST00000524533 HHIPL2Q6UWX4 724 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 CD99L2Q8TCZ2 262 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 HOOK2Q96ED9 719 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 OTUD5Q96G74 571 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 MS4A4AQ96JQ5 239 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 FBXO3Q9UK99 471 aa20.3■□□□□ 0.84
HIF3A-208ENST00000524533 HTTP42858 3142 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 CCL15-CCL14A0A0B4J2E2 113 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 CIAO1O76071 339 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 SLC34A2O95436 690 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 GTF2A2P52657 109 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 CCL15Q16663 113 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 ATP2B3Q16720 1220 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 BRI3BPQ8WY22 251 aa20.29■□□□□ 0.84
HIF3A-208ENST00000524533 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
HIF3A-208ENST00000524533 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
HIF3A-208ENST00000524533 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
HIF3A-208ENST00000524533 WRNIP1Q96S55 665 aa20.28■□□□□ 0.84
HIF3A-208ENST00000524533 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
HIF3A-208ENST00000524533 LRRFIP2Q9Y608 721 aaKnown RBP20.28■□□□□ 0.84
HIF3A-208ENST00000524533 SNCAIPQ9Y6H5 919 aa20.28■□□□□ 0.84
HIF3A-208ENST00000524533 RBBP6Q7Z6E9 1792 aaKnown RBP20.27■□□□□ 0.84
HIF3A-208ENST00000524533 SP3Q02447 781 aa20.27■□□□□ 0.84
HIF3A-208ENST00000524533 TAF1CQ15572 869 aaPredicted RBP20.27■□□□□ 0.84
HIF3A-208ENST00000524533 DCAF15Q66K64 600 aa20.27■□□□□ 0.84
HIF3A-208ENST00000524533 HDAC5Q9UQL6 1122 aa20.27■□□□□ 0.84
HIF3A-208ENST00000524533 EFCC1Q9HA90 598 aa20.26■□□□□ 0.83
HIF3A-208ENST00000524533 GNL3LQ9NVN8 582 aaKnown RBP20.26■□□□□ 0.83
HIF3A-208ENST00000524533 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
HIF3A-208ENST00000524533 PRDX5P30044 214 aa20.25■□□□□ 0.83
HIF3A-208ENST00000524533 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
HIF3A-208ENST00000524533 ERO1BQ86YB8 467 aa20.25■□□□□ 0.83
HIF3A-208ENST00000524533 FAM43AQ8N2R8 423 aa20.25■□□□□ 0.83
HIF3A-208ENST00000524533 ZKSCAN4Q969J2 545 aaPredicted RBP20.25■□□□□ 0.83
HIF3A-208ENST00000524533 ZFYVE28Q9HCC9 887 aa20.25■□□□□ 0.83
HIF3A-208ENST00000524533 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms