RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 NSFL1CQ9UNZ2 370 aaKnown RBP11.8□□□□□ -0.52
VPS13B-212ENST00000524330 TNRC6CQ9HCJ0 1690 aaKnown RBP11.79□□□□□ -0.52
VPS13B-212ENST00000524330 G3V3G9 751 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 SNAP23O00161 211 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
VPS13B-212ENST00000524330 SLC3A2P08195 630 aaKnown RBP11.79□□□□□ -0.52
VPS13B-212ENST00000524330 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
VPS13B-212ENST00000524330 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 GIMAP6Q6P9H5 292 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 Q6ZUG5 572 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 DZIP1Q86YF9 867 aaKnown RBP11.79□□□□□ -0.52
VPS13B-212ENST00000524330 AMOTL1Q8IY63 956 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 TNPO1Q92973 898 aaKnown RBP11.79□□□□□ -0.52
VPS13B-212ENST00000524330 KRT23Q9C075 422 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
VPS13B-212ENST00000524330 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 H0YIN7 160 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 BAG3O95817 575 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 SART3Q15020 963 aaKnown RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 STYK1Q6J9G0 422 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 CLEC17AQ6ZS10 378 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 FBXL16Q8N461 479 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 CNKSR1Q969H4 720 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 LLPHQ9BRT6 129 aaKnown RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 RGS17Q9UGC6 210 aaPredicted RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
VPS13B-212ENST00000524330 ATP6V0A2Q9Y487 856 aa11.78□□□□□ -0.52
VPS13B-212ENST00000524330 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.52
VPS13B-212ENST00000524330 CPA1P15085 419 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
VPS13B-212ENST00000524330 GPSM2P81274 684 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 HMGN5P82970 282 aaKnown RBP11.77□□□□□ -0.53
VPS13B-212ENST00000524330 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
VPS13B-212ENST00000524330 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 IFNL3Q8IZI9 196 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 MPNDQ8N594 471 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.53
VPS13B-212ENST00000524330 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
VPS13B-212ENST00000524330 TMEM87BQ96K49 555 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 MTA3Q9BTC8 594 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.53
VPS13B-212ENST00000524330 TAF1P21675 1872 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 ERICH2A1L162 156 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 CHGBP05060 677 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 SRGNP10124 158 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 PLCG2P16885 1265 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 EXOSC10Q01780 885 aaKnown RBP11.76□□□□□ -0.53
VPS13B-212ENST00000524330 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
VPS13B-212ENST00000524330 EZH2Q15910 746 aaKnown RBP11.76□□□□□ -0.53
VPS13B-212ENST00000524330 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 MFSD6Q6ZSS7 791 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
VPS13B-212ENST00000524330 COA1Q9GZY4 146 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
VPS13B-212ENST00000524330 MAST2Q6P0Q8 1798 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 PRC1O43663 620 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 PFKFB2O60825 505 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 BRD1O95696 1058 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 GJB2P29033 226 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 HAND2P61296 217 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
VPS13B-212ENST00000524330 ME3Q16798 604 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 DPP8Q6V1X1 898 aaPredicted RBP11.75□□□□□ -0.53
VPS13B-212ENST00000524330 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 SUPT20HQ8NEM7 779 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 TBC1D16Q8TBP0 767 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 BRF1Q92994 677 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.531e-6■■□□□ 13.2
VPS13B-212ENST00000524330 AGXT2Q9BYV1 514 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 NAP1L2Q9ULW6 460 aaPredicted RBP11.75□□□□□ -0.53
VPS13B-212ENST00000524330 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
VPS13B-212ENST00000524330 STX6O43752 255 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 CDKL5O76039 1030 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 BAG4O95429 457 aaKnown RBP11.74□□□□□ -0.53
VPS13B-212ENST00000524330 IL1R1P14778 569 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 MECOMQ03112 1051 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 AKNAD1Q5T1N1 836 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 STOX1Q6ZVD7 989 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 LCORLQ8N3X6 602 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 GTF3C6Q969F1 213 aa11.74□□□□□ -0.53
VPS13B-212ENST00000524330 NSUN4Q96CB9 384 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms