RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 APOBRQ0VD83 1088 aa6.38□□□□□ -1.39
CLINT1-208ENST00000524306 SNW1Q13573 536 aaKnown RBP6.38□□□□□ -1.39
CLINT1-208ENST00000524306 NOLC1Q14978 699 aaKnown RBP eCLIP6.38□□□□□ -1.39
CLINT1-208ENST00000524306 DDX54Q8TDD1 881 aaKnown RBP6.38□□□□□ -1.39
CLINT1-208ENST00000524306 ZNF594Q96JF6 807 aaPredicted RBP6.38□□□□□ -1.39
CLINT1-208ENST00000524306 PDCL3Q9H2J4 239 aa6.38□□□□□ -1.39
CLINT1-208ENST00000524306 CBX8Q9HC52 389 aa6.38□□□□□ -1.39
CLINT1-208ENST00000524306 ASAP1Q9ULH1 1129 aa6.38□□□□□ -1.39
CLINT1-208ENST00000524306 IRS4O14654 1257 aaPredicted RBP6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ZNF213O14771 459 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 GPAA1O43292 621 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 NR1I2O75469 434 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ZAP70P43403 619 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 FGD1P98174 961 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 IQCB1Q15051 598 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 PPP2R5BQ15173 497 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 TAF7LQ5H9L4 462 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 GORABQ5T7V8 394 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ILDR1Q86SU0 546 aaPredicted RBP6.37□□□□□ -1.39
CLINT1-208ENST00000524306 MYRIPQ8NFW9 859 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 TCEANC2Q96MN5 208 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ANO10Q9NW15 660 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 PDS5AQ29RF7 1337 aaKnown RBP6.37□□□□□ -1.39
CLINT1-208ENST00000524306 CNTNAP4Q9C0A0 1308 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 NRXN2Q9P2S2 1712 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 EXOC5O00471 708 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 AP5Z1O43299 807 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 PRC1O43663 620 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 PPP6R2O75170 966 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ADORA1P30542 326 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 MCAMP43121 646 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ZNF75DP51815 510 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 ANTXR2P58335 489 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 RBM6P78332 1123 aaKnown RBP6.37□□□□□ -1.39
CLINT1-208ENST00000524306 STK3Q13188 491 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 SYCP1Q15431 976 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 METTL24Q5JXM2 366 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 CCDC73Q6ZRK6 1079 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 FERMT3Q86UX7 667 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 FMR1NBQ8N0W7 255 aaPredicted RBP6.37□□□□□ -1.39
CLINT1-208ENST00000524306 LINC00301Q8NCQ3 95 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 CNNM2Q9H8M5 875 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 TBC1D2BQ9UPU7 963 aa6.37□□□□□ -1.39
CLINT1-208ENST00000524306 SH2B2O14492 632 aaPredicted RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 PCP11498 1178 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 KCNJ6P48051 423 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 FOXD4L6Q3SYB3 417 aaPredicted RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 ANO6Q4KMQ2 910 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 RC3H1Q5TC82 1133 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 FOXD4L3Q6VB84 417 aaPredicted RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CCAR1Q8IX12 1150 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 BICD2Q8TD16 824 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 MRPS27Q92552 414 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 SLC4A9Q96Q91 983 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 NAT10Q9H0A0 1025 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 UBR3Q6ZT12 1888 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 LRRC37AA6NMS7 1700 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 SLC5A1P13866 664 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CMA1P23946 247 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 ZNF165P49910 485 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 FKBP4Q02790 459 aaKnown RBP eCLIP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 SCARF1Q14162 830 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 RALYLQ86SE5 291 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 FAM89AQ96GI7 184 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 USP28Q96RU2 1077 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 STRBPQ96SI9 672 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 PUS7LQ9H0K6 701 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 GREM2Q9H772 168 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 TFIP11Q9UBB9 837 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 NDUFB9Q9Y6M9 179 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 MAST2Q6P0Q8 1798 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CHGBP05060 677 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 U2AF2P26368 475 aaKnown RBP eCLIP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 TRDNQ13061 729 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 HLFQ16534 295 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CCDC102BQ68D86 513 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CPLX2Q6PUV4 134 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CLEC4GQ6UXB4 293 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 TMTC2Q8N394 836 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 WASF1Q92558 559 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 C8orf76Q96K31 380 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 CDC5LQ99459 802 aaKnown RBP6.36□□□□□ -1.39
CLINT1-208ENST00000524306 KRT23Q9C075 422 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 NBPF3Q9H094 633 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 IMPACTQ9P2X3 320 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 ANAPC4Q9UJX5 808 aa6.36□□□□□ -1.39
CLINT1-208ENST00000524306 MYH14Q7Z406 1995 aaKnown RBP6.35□□□□□ -1.39
CLINT1-208ENST00000524306 KINO60870 393 aaKnown RBP6.35□□□□□ -1.39
CLINT1-208ENST00000524306 TUBB4AP04350 444 aa6.35□□□□□ -1.39
CLINT1-208ENST00000524306 PDE6AP16499 860 aa6.35□□□□□ -1.39
CLINT1-208ENST00000524306 KIF23Q02241 960 aaPredicted RBP6.35□□□□□ -1.39
CLINT1-208ENST00000524306 WASHC4Q2M389 1173 aa6.35□□□□□ -1.39
CLINT1-208ENST00000524306 MYSM1Q5VVJ2 828 aa6.35□□□□□ -1.39
CLINT1-208ENST00000524306 FAM173BQ6P4H8 233 aa6.35□□□□□ -1.39
CLINT1-208ENST00000524306 DZIP3Q86Y13 1208 aaKnown RBP6.35□□□□□ -1.39
CLINT1-208ENST00000524306 CERKQ8TCT0 537 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms