RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 TMEM94Q12767 1356 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
SPIDR-224ENST00000524126 AOX1Q06278 1338 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 CUTAO60888 179 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-224ENST00000524126 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 ZNF335Q9H4Z2 1342 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-224ENST00000524126 A0A0U1RQJ8 604 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 A0A1B0GVL5 298 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-224ENST00000524126 USP5P45974 858 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 CCT4P50991 539 aaKnown RBP11.7□□□□□ -0.54
SPIDR-224ENST00000524126 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 SRGAP1Q7Z6B7 1085 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 ATRIPQ8WXE1 791 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 N4BP2L2Q92802 583 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-224ENST00000524126 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 SIL1Q9H173 461 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 RAB21Q9UL25 225 aa11.7□□□□□ -0.54
SPIDR-224ENST00000524126 ELF1P32519 619 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 CFAP45Q9UL16 551 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 ERLIN1O75477 346 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 SYF2O95926 243 aaKnown RBP11.69□□□□□ -0.54
SPIDR-224ENST00000524126 GPTP24298 496 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 USP8P40818 1118 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 ME1P48163 572 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 HSD3B7Q9H2F3 369 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 CAPN7Q9Y6W3 813 aa11.69□□□□□ -0.54
SPIDR-224ENST00000524126 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
SPIDR-224ENST00000524126 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-224ENST00000524126 UBASH3AP57075 661 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 INHBEP58166 350 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 CFAP100Q494V2 611 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-224ENST00000524126 PDILTQ8N807 584 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 MSANTD4Q8NCY6 345 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 MRPL44Q9H9J2 332 aaKnown RBP11.68□□□□□ -0.54
SPIDR-224ENST00000524126 STRCQ7RTU9 1775 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 ANKARQ7Z5J8 1434 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 C21orf2O43822 256 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 INPP5BP32019 993 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 TRDNQ13061 729 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 HSP90AA4PQ58FG1 418 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 IGSF22Q8N9C0 903 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 CALR3Q96L12 384 aaKnown RBP11.68□□□□□ -0.54
SPIDR-224ENST00000524126 MCM8Q9UJA3 840 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 RCOR1Q9UKL0 485 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
SPIDR-224ENST00000524126 SLC27A2O14975 620 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 ARHGAP6O43182 974 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 PRPF6O94906 941 aaKnown RBP11.67□□□□□ -0.54
SPIDR-224ENST00000524126 SERPINC1P01008 464 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
SPIDR-224ENST00000524126 SEMA3FQ13275 785 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 MTX1Q13505 466 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 MTF1Q14872 753 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 BLOC1S2Q6QNY1 142 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 KCNB2Q92953 911 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-224ENST00000524126 FAM107BQ9H098 131 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-224ENST00000524126 FRMD3A2A2Y4 597 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 AMPHP49418 695 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 NDUFA8P51970 172 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 ADKP55263 362 aaKnown RBP11.67□□□□□ -0.54
SPIDR-224ENST00000524126 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 FMR1NBQ8N0W7 255 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-224ENST00000524126 GDAP1L1Q96MZ0 367 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 LZTFL1Q9NQ48 299 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
SPIDR-224ENST00000524126 NWD1Q149M9 1564 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 CHL1O00533 1208 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 EBAG9O00559 213 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 SETQ01105 290 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-224ENST00000524126 FCHSD1Q86WN1 690 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 PRPF38AQ8NAV1 312 aaKnown RBP11.66□□□□□ -0.54
SPIDR-224ENST00000524126 CTCFLQ8NI51 663 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-224ENST00000524126 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-224ENST00000524126 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 VSTM4Q8IW00 320 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 KIRREL3Q8IZU9 778 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 SMARCC1Q92922 1105 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-224ENST00000524126 CABS1Q96KC9 395 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 NEDD4P46934 1319 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
SPIDR-224ENST00000524126 NEDD9Q14511 834 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 MSL3Q8N5Y2 521 aaKnown RBP11.65□□□□□ -0.54
SPIDR-224ENST00000524126 JMYQ8N9B5 988 aa11.65□□□□□ -0.54
SPIDR-224ENST00000524126 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms