RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 CD209Q9NNX6 404 aa12.54□□□□□ -0.4
LAMA4-220ENST00000523765 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-220ENST00000523765 STAP2Q9UGK3 403 aa12.54□□□□□ -0.4
LAMA4-220ENST00000523765 PPP2R3BQ9Y5P8 575 aa12.54□□□□□ -0.4
LAMA4-220ENST00000523765 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 CCL5P13501 91 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 VGLL4Q14135 290 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 SUPT20HL1Q3ZLR7 823 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 TRIM47Q96LD4 638 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 TEPSINQ96N21 525 aa12.53□□□□□ -0.4
LAMA4-220ENST00000523765 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
LAMA4-220ENST00000523765 TLR2O60603 784 aa12.52□□□□□ -0.41
LAMA4-220ENST00000523765 IGKV5-2P06315 115 aa12.52□□□□□ -0.41
LAMA4-220ENST00000523765 GJA8P48165 433 aa12.52□□□□□ -0.41
LAMA4-220ENST00000523765 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
LAMA4-220ENST00000523765 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.41
LAMA4-220ENST00000523765 MGAMO43451 1857 aa12.52□□□□□ -0.41
LAMA4-220ENST00000523765 BTBD19C9JJ37 291 aa12.51□□□□□ -0.41
LAMA4-220ENST00000523765 HOXB7P09629 217 aa12.51□□□□□ -0.41
LAMA4-220ENST00000523765 MMP14P50281 582 aa12.51□□□□□ -0.41
LAMA4-220ENST00000523765 GTF2A2P52657 109 aa12.51□□□□□ -0.41
LAMA4-220ENST00000523765 DDX10Q13206 875 aaKnown RBP12.51□□□□□ -0.41
LAMA4-220ENST00000523765 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
LAMA4-220ENST00000523765 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-220ENST00000523765 TAF5LO75529 589 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 OSBPP22059 807 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 ARHGEF6Q15052 776 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 DEFB123Q8N688 67 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-220ENST00000523765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.5□□□□□ -0.41
LAMA4-220ENST00000523765 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 TDRD3Q9H7E2 651 aaKnown RBP12.5□□□□□ -0.41
LAMA4-220ENST00000523765 ZNF70Q9UC06 446 aaPredicted RBP12.5□□□□□ -0.41
LAMA4-220ENST00000523765 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 CPA4Q9UI42 421 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
LAMA4-220ENST00000523765 GJB1P08034 283 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
LAMA4-220ENST00000523765 GRK4P32298 578 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 PSMC4P43686 418 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
LAMA4-220ENST00000523765 CHRNDQ07001 517 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
LAMA4-220ENST00000523765 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
LAMA4-220ENST00000523765 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
LAMA4-220ENST00000523765 HTATIP2Q9BUP3 242 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 RNF208Q9H0X6 261 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 UNC93B1Q9H1C4 597 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
LAMA4-220ENST00000523765 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 MAP3K2Q9Y2U5 619 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
LAMA4-220ENST00000523765 ADGRA2Q96PE1 1338 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 A0A1W2PPC1 479 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 ANP32CO43423 234 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 FARP2O94887 1054 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-220ENST00000523765 MAP3K9P80192 1104 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 KIF22Q14807 665 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 ZKSCAN4Q969J2 545 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-220ENST00000523765 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
LAMA4-220ENST00000523765 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 IRF6O14896 467 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 MYO1BO43795 1136 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 ITGA6P23229 1130 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 GRIK5Q16478 980 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
LAMA4-220ENST00000523765 MYPNQ86TC9 1320 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 EVI5O60447 810 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 IL1R1P14778 569 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 IGHMBP2P38935 993 aaKnown RBP12.46□□□□□ -0.41
LAMA4-220ENST00000523765 KCNJ4P48050 445 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 CACNB3P54284 484 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 PRKCZQ05513 592 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 C8orf58Q8NAV2 365 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 NKX2-3Q8TAU0 364 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 RAET1EQ8TD07 263 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 GDF15Q99988 308 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 ANKRD2Q9GZV1 360 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
LAMA4-220ENST00000523765 MTMR10Q9NXD2 777 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
LAMA4-220ENST00000523765 CDH23Q9H251 3354 aa12.45□□□□□ -0.42
LAMA4-220ENST00000523765 SGPL1O95470 568 aa12.45□□□□□ -0.42
LAMA4-220ENST00000523765 GNRH1P01148 92 aa12.45□□□□□ -0.42
LAMA4-220ENST00000523765 CETPP11597 493 aa12.45□□□□□ -0.42
LAMA4-220ENST00000523765 PRMT2P55345 433 aa12.45□□□□□ -0.42
LAMA4-220ENST00000523765 DIS3LQ8TF46 1054 aaKnown RBP12.45□□□□□ -0.42
LAMA4-220ENST00000523765 BIN2Q9UBW5 565 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-220ENST00000523765 CSADQ9Y600 493 aa12.45□□□□□ -0.42
LAMA4-220ENST00000523765 PI4KAP2A4QPH2 592 aa12.44□□□□□ -0.42
LAMA4-220ENST00000523765 NEURL1BA8MQ27 555 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms