RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 RPS26P11Q5JNZ5 115 aaPredicted RBP8.02□□□□□ -1.13
PCM1-219ENST00000523540 ANKRD24Q8TF21 1146 aa8.02□□□□□ -1.13
PCM1-219ENST00000523540 BCO2Q9BYV7 579 aa8.02□□□□□ -1.13
PCM1-219ENST00000523540 OSBPL7Q9BZF2 842 aa8.02□□□□□ -1.13
PCM1-219ENST00000523540 PARP2Q9UGN5 583 aa8.02□□□□□ -1.13
PCM1-219ENST00000523540 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.134e-9■□□□□ 11.3
PCM1-219ENST00000523540 EPHA1P21709 976 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 GNA15P30679 374 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 GRIA4P48058 902 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 DAB2P98082 770 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 ZNF326Q5BKZ1 582 aaKnown RBP8.01□□□□□ -1.13
PCM1-219ENST00000523540 NXPE4Q6UWF7 544 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 LACRTQ9GZZ8 138 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 SPG7Q9UQ90 795 aa8.01□□□□□ -1.13
PCM1-219ENST00000523540 IRAK1P51617 712 aa8□□□□□ -1.13
PCM1-219ENST00000523540 TMC4Q7Z404 712 aa8□□□□□ -1.13
PCM1-219ENST00000523540 VN1R5Q7Z5H4 357 aa8□□□□□ -1.13
PCM1-219ENST00000523540 ABCB6Q9NP58 842 aa8□□□□□ -1.13
PCM1-219ENST00000523540 SEC31BQ9NQW1 1179 aa8□□□□□ -1.13
PCM1-219ENST00000523540 OAS3Q9Y6K5 1087 aaKnown RBP8□□□□□ -1.13
PCM1-219ENST00000523540 A0A096LPE4 126 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 A0A1W2PPZ6 126 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 FSCN2O14926 492 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 SPRED3Q2MJR0 410 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 CLEC4MQ9H2X3 399 aaPredicted RBP7.99□□□□□ -1.13
PCM1-219ENST00000523540 C12orf49Q9H741 205 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
PCM1-219ENST00000523540 AK5Q9Y6K8 562 aa7.99□□□□□ -1.13
PCM1-219ENST00000523540 ARID1BQ8NFD5 2236 aaPredicted RBP7.99□□□□□ -1.13
PCM1-219ENST00000523540 GSC2O15499 205 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 ARL4DP49703 201 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 XPCQ01831 940 aaPredicted RBP7.98□□□□□ -1.13
PCM1-219ENST00000523540 LCE1DQ5T752 114 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 FAM161BQ96MY7 647 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 KRTAP4-7Q9BYR0 210 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 RAXQ9Y2V3 346 aa7.98□□□□□ -1.13
PCM1-219ENST00000523540 LINC01387J3KSC0 135 aa7.97□□□□□ -1.13
PCM1-219ENST00000523540 TAL1P17542 331 aaPredicted RBP7.97□□□□□ -1.13
PCM1-219ENST00000523540 CD68P34810 354 aaPredicted RBP7.97□□□□□ -1.13
PCM1-219ENST00000523540 GP2P55259 537 aaKnown RBP7.97□□□□□ -1.13
PCM1-219ENST00000523540 C19orf57Q0VDD7 668 aa7.97□□□□□ -1.13
PCM1-219ENST00000523540 PSMD2Q13200 908 aa7.97□□□□□ -1.13
PCM1-219ENST00000523540 ZNF576Q9H609 170 aa7.97□□□□□ -1.13
PCM1-219ENST00000523540 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
PCM1-219ENST00000523540 COBLO75128 1261 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 B3GALT4O96024 378 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 TGFB1P01137 390 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 ESRRAP11474 423 aaPredicted RBP7.96□□□□□ -1.14
PCM1-219ENST00000523540 FCGRTP55899 365 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 IKBKEQ14164 716 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.96□□□□□ -1.14
PCM1-219ENST00000523540 C3orf58Q8NDZ4 430 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 PPM1HQ9ULR3 514 aa7.96□□□□□ -1.14
PCM1-219ENST00000523540 SPINK2P20155 84 aa7.95□□□□□ -1.14
PCM1-219ENST00000523540 EIF4BP23588 611 aaKnown RBP7.95□□□□□ -1.14
PCM1-219ENST00000523540 ITGAEP38570 1179 aa7.95□□□□□ -1.14
PCM1-219ENST00000523540 MRPL58Q14197 206 aaKnown RBP7.95□□□□□ -1.14
PCM1-219ENST00000523540 ZDHHC13Q8IUH4 622 aa7.95□□□□□ -1.14
PCM1-219ENST00000523540 GALNT11Q8NCW6 608 aa7.95□□□□□ -1.14
PCM1-219ENST00000523540 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
PCM1-219ENST00000523540 UBL7Q96S82 380 aaPredicted RBP7.95□□□□□ -1.14
PCM1-219ENST00000523540 FAM8A1Q9UBU6 413 aa7.95□□□□□ -1.14
PCM1-219ENST00000523540 UNCXA6NJT0 531 aa7.94□□□□□ -1.14
PCM1-219ENST00000523540 SORBS3O60504 671 aa7.94□□□□□ -1.14
PCM1-219ENST00000523540 ADAMTS4O75173 837 aa7.94□□□□□ -1.14
PCM1-219ENST00000523540 GSTT1P30711 240 aa7.94□□□□□ -1.14
PCM1-219ENST00000523540 PCDH1Q08174 1060 aa7.94□□□□□ -1.14
PCM1-219ENST00000523540 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
PCM1-219ENST00000523540 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
PCM1-219ENST00000523540 MEGF11A6BM72 1044 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 SOX1O00570 391 aaPredicted RBP7.93□□□□□ -1.14
PCM1-219ENST00000523540 CTSHP09668 335 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 USP17L7P0C7H9 530 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 UVSSAQ2YD98 709 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 TXNDC11Q6PKC3 985 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 DTHD1Q6ZMT9 781 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 ARMC10Q8N2F6 343 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 ZNF428Q96B54 188 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 NRSN2Q9GZP1 204 aa7.93□□□□□ -1.14
PCM1-219ENST00000523540 GLB1P16278 677 aa7.92□□□□□ -1.14
PCM1-219ENST00000523540 CDC25BP30305 580 aa7.92□□□□□ -1.14
PCM1-219ENST00000523540 FAAP100Q0VG06 881 aa7.92□□□□□ -1.14
PCM1-219ENST00000523540 MRS2Q9HD23 443 aa7.92□□□□□ -1.14
PCM1-219ENST00000523540 SYNGAP1Q96PV0 1343 aa7.92□□□□□ -1.14
PCM1-219ENST00000523540 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
PCM1-219ENST00000523540 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 HGSNATQ68CP4 663 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 KLHDC7BQ96G42 594 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 CEP41Q9BYV8 373 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 STOML1Q9UBI4 398 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 AKAP2Q9Y2D5 859 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
PCM1-219ENST00000523540 ADAM11O75078 769 aa7.9□□□□□ -1.14
PCM1-219ENST00000523540 CYP11A1P05108 521 aa7.9□□□□□ -1.14
PCM1-219ENST00000523540 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms