RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
LINC00534-203ENST00000523406 WWC3Q9ULE0 1092 aa8.68□□□□□ -1.02
LINC00534-203ENST00000523406 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.68□□□□□ -1.02
LINC00534-203ENST00000523406 PIK3C2BO00750 1634 aa8.68□□□□□ -1.02
LINC00534-203ENST00000523406 PREX1Q8TCU6 1659 aa8.68□□□□□ -1.02
LINC00534-203ENST00000523406 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
LINC00534-203ENST00000523406 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 MMP20O60882 483 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 RARAP10276 462 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 IQGAP1P46940 1657 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 CLTCQ00610 1675 aaKnown RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 CCDC184Q52MB2 194 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 CC2D1BQ5T0F9 858 aaKnown RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 TTC39BQ5VTQ0 682 aaPredicted RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 USPL1Q5W0Q7 1092 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 OR13H1Q8NG92 308 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 BHMTQ93088 406 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 PNMA5Q96PV4 448 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 MYBBP1AQ9BQG0 1328 aaKnown RBP8.67□□□□□ -1.02
LINC00534-203ENST00000523406 STK26Q9P289 416 aa8.67□□□□□ -1.02
LINC00534-203ENST00000523406 PPLO60437 1756 aa8.66□□□□□ -1.02
LINC00534-203ENST00000523406 IFT172Q9UG01 1749 aa8.66□□□□□ -1.02
LINC00534-203ENST00000523406 TNRQ92752 1358 aa8.66□□□□□ -1.02
LINC00534-203ENST00000523406 FGD1P98174 961 aa8.66□□□□□ -1.02
LINC00534-203ENST00000523406 ALG1LQ6GMV1 187 aa8.66□□□□□ -1.02
LINC00534-203ENST00000523406 PMEPA1Q969W9 287 aa8.66□□□□□ -1.02
LINC00534-203ENST00000523406 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 NEXMIFQ5QGS0 1516 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 EREGO14944 169 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.02
LINC00534-203ENST00000523406 MX2P20592 715 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 ATP2B2Q01814 1243 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 ZNF468Q5VIY5 522 aaPredicted RBP8.65□□□□□ -1.02
LINC00534-203ENST00000523406 FBF1Q8TES7 1133 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 TLR7Q9NYK1 1049 aaKnown RBP8.65□□□□□ -1.02
LINC00534-203ENST00000523406 POGKQ9P215 609 aa8.65□□□□□ -1.02
LINC00534-203ENST00000523406 RIMS2Q9UQ26 1411 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 ERBB4Q15303 1308 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 EVC2Q86UK5 1308 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 CYP2E1P05181 493 aaPredicted RBP8.64□□□□□ -1.03
LINC00534-203ENST00000523406 BMP4P12644 408 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 CES1P23141 567 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 SOX18P35713 384 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 CCDC74AQ96AQ1 378 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 DUSP9Q99956 384 aaKnown RBP8.64□□□□□ -1.03
LINC00534-203ENST00000523406 RNF19AQ9NV58 838 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.64□□□□□ -1.03
LINC00534-203ENST00000523406 TMEM131LA2VDJ0 1609 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 SPATA31D1Q6ZQQ2 1576 aa8.64□□□□□ -1.03
LINC00534-203ENST00000523406 BRD4O60885 1362 aaPredicted RBP8.63□□□□□ -1.03
LINC00534-203ENST00000523406 SBNO2Q9Y2G9 1366 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 NFX1Q12986 1120 aaKnown RBP8.63□□□□□ -1.03
LINC00534-203ENST00000523406 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.038e-7■■■□□ 16.3
LINC00534-203ENST00000523406 DHX32Q7L7V1 743 aaKnown RBP8.63□□□□□ -1.03
LINC00534-203ENST00000523406 SYT9Q86SS6 491 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 GALNT12Q8IXK2 581 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
LINC00534-203ENST00000523406 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 KIAA1522Q9P206 1035 aaPredicted RBP8.63□□□□□ -1.03
LINC00534-203ENST00000523406 SALL4Q9UJQ4 1053 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 A2ML1A8K2U0 1454 aa8.63□□□□□ -1.03
LINC00534-203ENST00000523406 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 ADGRB1O14514 1584 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 SIN3BO75182 1162 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 KIF4AO95239 1232 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 POLR3DP05423 398 aaPredicted RBP8.62□□□□□ -1.03
LINC00534-203ENST00000523406 PSAPP07602 524 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 RNFT1Q5M7Z0 435 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 MRRFQ96E11 262 aaKnown RBP8.62□□□□□ -1.03
LINC00534-203ENST00000523406 PARP2Q9UGN5 583 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 KLF15Q9UIH9 416 aa8.62□□□□□ -1.03
LINC00534-203ENST00000523406 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 ARAFP10398 606 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 MAP2K3P46734 347 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 CEBPAP49715 358 aaPredicted RBP8.61□□□□□ -1.03
LINC00534-203ENST00000523406 NRLP54845 237 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 DAB2P98082 770 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 PLAURQ03405 335 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 COL13A1Q5TAT6 717 aaPredicted RBP8.61□□□□□ -1.03
LINC00534-203ENST00000523406 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 PNISRQ8TF01 805 aaKnown RBP8.61□□□□□ -1.03
LINC00534-203ENST00000523406 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 PUS7Q96PZ0 661 aaKnown RBP8.61□□□□□ -1.03
LINC00534-203ENST00000523406 PRAM1Q96QH2 718 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 COL25A1Q9BXS0 654 aaPredicted RBP8.61□□□□□ -1.03
LINC00534-203ENST00000523406 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
LINC00534-203ENST00000523406 KDM5AP29375 1690 aaKnown RBP8.6□□□□□ -1.03
LINC00534-203ENST00000523406 ZBTB42B2RXF5 422 aa8.6□□□□□ -1.03
LINC00534-203ENST00000523406 VAMP1P23763 118 aa8.6□□□□□ -1.03
LINC00534-203ENST00000523406 GNA15P30679 374 aa8.6□□□□□ -1.03
LINC00534-203ENST00000523406 IRS1P35568 1242 aa8.6□□□□□ -1.03
LINC00534-203ENST00000523406 TMC4Q7Z404 712 aa8.6□□□□□ -1.03
LINC00534-203ENST00000523406 EPS8L3Q8TE67 593 aaKnown RBP8.6□□□□□ -1.03
LINC00534-203ENST00000523406 MDFIQ99750 246 aa8.6□□□□□ -1.03
LINC00534-203ENST00000523406 NPHS2Q9NP85 383 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms