RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 BMP15O95972 392 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 KANK3Q6NY19 840 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 DSCC1Q9BVC3 393 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 SEPT11Q9NVA2 429 aaKnown RBP14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 MED14O60244 1454 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 PIK3C2BO00750 1634 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 UQCRHLA0A096LP55 91 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 UQCRHP07919 91 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 TYRO3Q06418 890 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 DHX58Q96C10 678 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 PDE8BO95263 885 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 CAVIN2O95810 425 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 BRAPQ7Z569 592 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 PHKBQ93100 1093 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 TTC6Q86TZ1 520 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 ZNF830Q96NB3 372 aaPredicted RBP14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 RUFY1Q96T51 708 aa14.98□□□□□ -0.01
PCDHGB1-201ENST00000523390 A0A1B0GVL5 298 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 IGKV5-2P06315 115 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 HSPD1P10809 573 aaKnown RBP14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 CALML3P27482 149 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 PTPN12Q05209 780 aaKnown RBP14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 PTPN14Q15678 1187 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 ENOX2Q16206 610 aaKnown RBP14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 SEC31BQ9NQW1 1179 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 LAMC1P11047 1609 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 EIF6P56537 245 aaKnown RBP14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 DPP8Q6V1X1 898 aaPredicted RBP14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 KIAA1328Q86T90 577 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 AOPEPQ8N6M6 819 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 TSG101Q99816 390 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 ANTXR1Q9H6X2 564 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 AGLP35573 1532 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 SASH1O94885 1247 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 MTIF2P46199 727 aaKnown RBP14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 TNNI2P48788 182 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 CHRNDQ07001 517 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 NLRP10Q86W26 655 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 KRT2P35908 639 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 HSP90B2PQ58FF3 399 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 FKBP15Q5T1M5 1219 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 MSL1Q68DK7 614 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
PCDHGB1-201ENST00000523390 STAT6P42226 847 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 PKP1Q13835 747 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 EPHA10Q5JZY3 1008 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 MAPKAPK5Q8IW41 473 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 C16orf45Q96MC5 204 aaPredicted RBP14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 V9GY48 417 aaPredicted RBP14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 AMPD3Q01432 767 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 ADCK5Q3MIX3 580 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 PI16Q6UXB8 463 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 JDP2Q8WYK2 163 aa14.96□□□□□ -0.01
PCDHGB1-201ENST00000523390 MCM7P33993 719 aa14.96□□□□□ -0.02
PCDHGB1-201ENST00000523390 MATR3P43243 847 aaKnown RBP eCLIP14.96□□□□□ -0.02
PCDHGB1-201ENST00000523390 LSG1Q9H089 658 aaKnown RBP14.96□□□□□ -0.02
PCDHGB1-201ENST00000523390 C6orf50Q9HD87 102 aa14.96□□□□□ -0.02
PCDHGB1-201ENST00000523390 CPS1P31327 1500 aa14.96□□□□□ -0.02
PCDHGB1-201ENST00000523390 SSH2Q76I76 1423 aa14.96□□□□□ -0.02
PCDHGB1-201ENST00000523390 CD2BP2O95400 341 aaKnown RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 NBPF14Q5TI25 921 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZNF771Q7L3S4 317 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 RRP36Q96EU6 259 aaKnown RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 LLPHQ9BRT6 129 aaKnown RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 QTRT2Q9H974 415 aaKnown RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 LMOD1P29536 600 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 CHMP4BP1P59074 171 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 CACNA2D4Q7Z3S7 1137 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 NUP88Q99567 741 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 hCG_1642624A0A1W2PR95 340 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 FGAP02671 866 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 RRAGBQ5VZM2 374 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 USP17L12C9JPN9 530 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 USP17L21D6R901 530 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 POLA2Q14181 598 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 PYM1Q9BRP8 204 aaKnown RBP14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 SAMM50Q9Y512 469 aa14.95□□□□□ -0.02
PCDHGB1-201ENST00000523390 AKNAD1Q5T1N1 836 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 EHMT1Q9H9B1 1298 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 TPCN1Q9ULQ1 816 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 TNS3Q68CZ2 1445 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 GADD45BO75293 160 aaPredicted RBP14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 DIS3L2Q8IYB7 885 aaKnown RBP14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 ZNF397Q8NF99 534 aaPredicted RBP14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 TRIM47Q96LD4 638 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 POLD1P28340 1107 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 CCDC181Q5TID7 509 aa14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 TRPC5Q9UL62 973 aaPredicted RBP14.94□□□□□ -0.02
PCDHGB1-201ENST00000523390 N4BP3O15049 544 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 BRD1O95696 1058 aa14.93□□□□□ -0.02
PCDHGB1-201ENST00000523390 CCDC186Q7Z3E2 898 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms