RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 USP17L7P0C7H9 530 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 VAMP1P23763 118 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 TSNAXIP1Q2TAA8 658 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 ASAP3Q8TDY4 903 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 PSMG3-AS1Q96PY0 264 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 ABCB6Q9NP58 842 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 RNF112Q9ULX5 631 aa8.21□□□□□ -1.1
SKP1-211ENST00000523359 FAM177BA6PVY3 158 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
SKP1-211ENST00000523359 RECKO95980 971 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 CTSHP09668 335 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 ITGAEP38570 1179 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 GRIA4P48058 902 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 FCGRTP55899 365 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 PRPF40BQ6NWY9 871 aaKnown RBP8.2□□□□□ -1.1
SKP1-211ENST00000523359 KLHL23Q8NBE8 558 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 SRCIN1Q9C0H9 1055 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 BHLHE41Q9C0J9 482 aaPredicted RBP8.2□□□□□ -1.1
SKP1-211ENST00000523359 PPP4R2Q9NY27 417 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 FAM8A1Q9UBU6 413 aa8.2□□□□□ -1.1
SKP1-211ENST00000523359 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 ADAM11O75078 769 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 DUOXA2Q1HG44 320 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 SPRED3Q2MJR0 410 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 UBASH3BQ8TF42 649 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 KLHDC7BQ96G42 594 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 BACH2Q9BYV9 841 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 ADAM19Q9H013 955 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 RAXQ9Y2V3 346 aa8.19□□□□□ -1.1
SKP1-211ENST00000523359 A0A096LPE4 126 aa8.18□□□□□ -1.1
SKP1-211ENST00000523359 A0A1W2PPZ6 126 aa8.18□□□□□ -1.1
SKP1-211ENST00000523359 DTHD1Q6ZMT9 781 aa8.18□□□□□ -1.1
SKP1-211ENST00000523359 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
SKP1-211ENST00000523359 SEC31BQ9NQW1 1179 aa8.18□□□□□ -1.1
SKP1-211ENST00000523359 H3BRJ5 948 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 GSTT1P30711 240 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 CABP4P57796 275 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 LDLRAD1Q5T700 205 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 ARMC10Q8N2F6 343 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 C3orf58Q8NDZ4 430 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 CRELD1Q96HD1 420 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 CEP41Q9BYV8 373 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 AKAP2Q9Y2D5 859 aa8.17□□□□□ -1.1
SKP1-211ENST00000523359 ITPKAP23677 461 aa8.16□□□□□ -1.1
SKP1-211ENST00000523359 NLRP12P59046 1061 aa8.16□□□□□ -1.1
SKP1-211ENST00000523359 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
SKP1-211ENST00000523359 SLC7A3Q8WY07 619 aa8.16□□□□□ -1.1
SKP1-211ENST00000523359 UTP4Q969X6 686 aaKnown RBP8.16□□□□□ -1.1
SKP1-211ENST00000523359 STOML1Q9UBI4 398 aa8.16□□□□□ -1.1
SKP1-211ENST00000523359 DHX15O43143 795 aaKnown RBP8.15□□□□□ -1.1
SKP1-211ENST00000523359 SSTR4P31391 388 aa8.15□□□□□ -1.1
SKP1-211ENST00000523359 PIP4K2BP78356 416 aa8.15□□□□□ -1.1
SKP1-211ENST00000523359 BSNDQ8WZ55 320 aa8.15□□□□□ -1.1
SKP1-211ENST00000523359 SOX13Q9UN79 622 aa8.15□□□□□ -1.1
SKP1-211ENST00000523359 TTF2Q9UNY4 1162 aaKnown RBP8.15□□□□□ -1.1
SKP1-211ENST00000523359 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
SKP1-211ENST00000523359 XRCC5P13010 732 aaKnown RBP8.14□□□□□ -1.11
SKP1-211ENST00000523359 HGSNATQ68CP4 663 aa8.14□□□□□ -1.11
SKP1-211ENST00000523359 FAM46AQ96IP4 442 aaKnown RBP8.14□□□□□ -1.11
SKP1-211ENST00000523359 ZNF576Q9H609 170 aa8.14□□□□□ -1.11
SKP1-211ENST00000523359 PCMTD2Q9NV79 361 aa8.14□□□□□ -1.11
SKP1-211ENST00000523359 FBXO24O75426 580 aa8.13□□□□□ -1.11
SKP1-211ENST00000523359 PTPN12Q05209 780 aaKnown RBP8.13□□□□□ -1.11
SKP1-211ENST00000523359 UVSSAQ2YD98 709 aa8.13□□□□□ -1.11
SKP1-211ENST00000523359 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
SKP1-211ENST00000523359 WNT8BQ93098 351 aa8.13□□□□□ -1.11
SKP1-211ENST00000523359 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
SKP1-211ENST00000523359 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
SKP1-211ENST00000523359 GSC2O15499 205 aa8.12□□□□□ -1.11
SKP1-211ENST00000523359 TAF1CQ15572 869 aaPredicted RBP8.12□□□□□ -1.11
SKP1-211ENST00000523359 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
SKP1-211ENST00000523359 MYRFLQ96LU7 910 aa8.12□□□□□ -1.11
SKP1-211ENST00000523359 C7orf69Q9H7B7 122 aa8.12□□□□□ -1.11
SKP1-211ENST00000523359 HMX2A2RU54 273 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 SCAMP3O14828 347 aaKnown RBP8.11□□□□□ -1.11
SKP1-211ENST00000523359 SART1O43290 800 aaKnown RBP8.11□□□□□ -1.11
SKP1-211ENST00000523359 TGFB1P01137 390 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 TCF3P15923 654 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 ZNF157P51786 506 aaPredicted RBP8.11□□□□□ -1.11
SKP1-211ENST00000523359 PCDH1Q08174 1060 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 CLEC4MQ9H2X3 399 aaPredicted RBP8.11□□□□□ -1.11
SKP1-211ENST00000523359 IGSF5Q9NSI5 407 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 PPM1HQ9ULR3 514 aa8.11□□□□□ -1.11
SKP1-211ENST00000523359 PREPP48147 710 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
SKP1-211ENST00000523359 C19orf57Q0VDD7 668 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 FAAP100Q0VG06 881 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 ZNF423Q2M1K9 1284 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 RUSC1Q9BVN2 902 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 ZFYVE1Q9HBF4 777 aa8.1□□□□□ -1.11
SKP1-211ENST00000523359 GPN3Q9UHW5 284 aaPredicted RBP8.1□□□□□ -1.11
SKP1-211ENST00000523359 SOX1O00570 391 aaPredicted RBP8.09□□□□□ -1.11
SKP1-211ENST00000523359 ESRRAP11474 423 aaPredicted RBP8.09□□□□□ -1.11
SKP1-211ENST00000523359 RANGAP1P46060 587 aaPredicted RBP8.09□□□□□ -1.11
SKP1-211ENST00000523359 CD97P48960 835 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms