RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
EXTL3-214ENST00000523271 SLC8A1P32418 973 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 DAPK1P53355 1430 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 SPOPO43791 374 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 TSPY3P0CV98 308 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 TSPY8P0CW00 308 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 MTMR3Q13615 1198 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 CRNKL1Q9BZJ0 848 aaKnown RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 TPX2Q9ULW0 747 aaKnown RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 SCHIP1Q9P0W5 487 aaPredicted RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 KIF21AQ7Z4S6 1674 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 CABS1Q96KC9 395 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
EXTL3-214ENST00000523271 HIP1RO75146 1068 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
EXTL3-214ENST00000523271 SSFA2P28290 1259 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 PPP1R2P41236 205 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 KRT5P13647 590 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 PPP2R3AQ06190 1150 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 TRIM14Q14142 442 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 WTAPQ15007 396 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 ZGPATQ8N5A5 531 aaKnown RBP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 LZTFL1Q9NQ48 299 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 CALML3P27482 149 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 RBSNQ9H1K0 784 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 KIF11P52732 1056 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 P3H4Q92791 437 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 SPDL1Q96EA4 605 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 PARP2Q9UGN5 583 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 RTL1A6NKG5 1358 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 ZBTB24O43167 697 aaPredicted RBP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 EPB41P11171 864 aaKnown RBP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 CTTNBP2NLQ9P2B4 639 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 ARMC9Q7Z3E5 817 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 NRBF2Q96F24 287 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 CLCN1P35523 988 aa13.85□□□□□ -0.19
EXTL3-214ENST00000523271 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
EXTL3-214ENST00000523271 NEK1Q96PY6 1258 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 HNRNPCL2B2RXH8 293 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 HNRNPCL1O60812 293 aaKnown RBP13.84□□□□□ -0.19
EXTL3-214ENST00000523271 ATICP31939 592 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 ESRRGP62508 458 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 AOPEPQ8N6M6 819 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
EXTL3-214ENST00000523271 TRIM68Q6AZZ1 485 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 NOX5Q96PH1 765 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 RNF40O75150 1001 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 CALM1P0DP23 149 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 CALM2P0DP24 149 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 CALM3P0DP25 149 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 RLBP1P12271 317 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 CASC4Q6P4E1 433 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 FAM71BQ8TC56 605 aa13.84□□□□□ -0.19
EXTL3-214ENST00000523271 CDC5LQ99459 802 aaKnown RBP13.84□□□□□ -0.19
EXTL3-214ENST00000523271 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
EXTL3-214ENST00000523271 PPFIA3O75145 1194 aa13.83□□□□□ -0.19
EXTL3-214ENST00000523271 VPS41P49754 854 aa13.83□□□□□ -0.19
EXTL3-214ENST00000523271 ATP2B3Q16720 1220 aa13.83□□□□□ -0.19
EXTL3-214ENST00000523271 MYCBPQ99417 103 aaPredicted RBP13.83□□□□□ -0.19
EXTL3-214ENST00000523271 PPP2R5CQ13362 524 aa13.83□□□□□ -0.19
EXTL3-214ENST00000523271 TRIM60Q495X7 471 aa13.83□□□□□ -0.19
EXTL3-214ENST00000523271 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.19
EXTL3-214ENST00000523271 PAWRQ96IZ0 340 aaKnown RBP13.83□□□□□ -0.19
EXTL3-214ENST00000523271 RPGRIP1Q96KN7 1286 aa13.83□□□□□ -0.19
EXTL3-214ENST00000523271 TRIM6Q9C030 488 aaPredicted RBP13.83□□□□□ -0.19
EXTL3-214ENST00000523271 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
EXTL3-214ENST00000523271 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 FAM8A1Q9UBU6 413 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 FNBP4Q8N3X1 1017 aaPredicted RBP13.83□□□□□ -0.2
EXTL3-214ENST00000523271 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.2
EXTL3-214ENST00000523271 LRRD1A4D1F6 860 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 RFX1P22670 979 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 GTF3C6Q969F1 213 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 STX8Q9UNK0 236 aa13.83□□□□□ -0.2
EXTL3-214ENST00000523271 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 PFDN6O15212 129 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 TTC4O95801 387 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 PYGLP06737 847 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 RTN1Q16799 776 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 ZBTB43O43298 467 aa13.82□□□□□ -0.2
EXTL3-214ENST00000523271 STAG1Q8WVM7 1258 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms